CODEWITHSUNDEEP
pythonsubprocessstdin
Daryl Spitzer
Daryl Spitzer

Reputation: 149364

How do I pass a string into subprocess.Popen (using the stdin argument)?

If I do the following:

import subprocess
from cStringIO import StringIO
subprocess.Popen(['grep','f'],stdout=subprocess.PIPE,stdin=StringIO('one\ntwo\nthree\nfour\nfive\nsix\n')).communicate()[0]

I get:

Traceback (most recent call last):
  File "<stdin>", line 1, in ?
  File "/build/toolchain/mac32/python-2.4.3/lib/python2.4/subprocess.py", line 533, in __init__
    (p2cread, p2cwrite,
  File "/build/toolchain/mac32/python-2.4.3/lib/python2.4/subprocess.py", line 830, in _get_handles
    p2cread = stdin.fileno()
AttributeError: 'cStringIO.StringI' object has no attribute 'fileno'

Apparently a cStringIO.StringIO object doesn't quack close enough to a file duck to suit subprocess.Popen. How do I work around this?

Upvotes: 349

Views: 452810

Answers (12)

Flimm
Flimm

Reputation: 150653

There's a beautiful solution if you're using Python 3.4 or better. Use the input argument instead of the stdin argument, which accepts a bytes argument:

output_bytes = subprocess.check_output(
    ["sed", "s/foo/bar/"],
    input=b"foo",
)

This works for check_output and run, but not call or check_call for some reason.

In Python 3.7+, you can also add text=True to make check_output take a string as input and return a string (instead of bytes):

output_string = subprocess.check_output(
    ["sed", "s/foo/bar/"],
    input="foo",
    text=True,
)

Upvotes: 44

Ben DeMott
Ben DeMott

Reputation: 3604

This is overkill for grep, but through my journeys I've learned about the Linux command expect, and the python library pexpect

  • expect: dialogue with interactive programs
  • pexpect: Python module for spawning child applications; controlling them; and responding to expected patterns in their output.
import pexpect
child = pexpect.spawn('grep f', timeout=10)
child.sendline('text to match')
print(child.before)

Working with interactive shell applications like ftp is trivial with pexpect

import pexpect
child = pexpect.spawn ('ftp ftp.openbsd.org')
child.expect ('Name .*: ')
child.sendline ('anonymous')
child.expect ('Password:')
child.sendline ('[email protected]')
child.expect ('ftp> ')
child.sendline ('ls /pub/OpenBSD/')
child.expect ('ftp> ')
print child.before   # Print the result of the ls command.
child.interact()     # Give control of the child to the user.

Upvotes: 3

jfs
jfs

Reputation: 414235

Popen.communicate() documentation:

Note that if you want to send data to the process’s stdin, you need to create the Popen object with stdin=PIPE. Similarly, to get anything other than None in the result tuple, you need to give stdout=PIPE and/or stderr=PIPE too.

Replacing os.popen*

    pipe = os.popen(cmd, 'w', bufsize)
    # ==>
    pipe = Popen(cmd, shell=True, bufsize=bufsize, stdin=PIPE).stdin

Warning Use communicate() rather than stdin.write(), stdout.read() or stderr.read() to avoid deadlocks due to any of the other OS pipe buffers filling up and blocking the child process.

So your example could be written as follows:

from subprocess import Popen, PIPE, STDOUT

p = Popen(['grep', 'f'], stdout=PIPE, stdin=PIPE, stderr=STDOUT)    
grep_stdout = p.communicate(input=b'one\ntwo\nthree\nfour\nfive\nsix\n')[0]
print(grep_stdout.decode())
# -> four
# -> five
# ->

On Python 3.5+ (3.6+ for encoding), you could use subprocess.run, to pass input as a string to an external command and get its exit status, and its output as a string back in one call:

#!/usr/bin/env python3
from subprocess import run, PIPE

p = run(['grep', 'f'], stdout=PIPE,
        input='one\ntwo\nthree\nfour\nfive\nsix\n', encoding='ascii')
print(p.returncode)
# -> 0
print(p.stdout)
# -> four
# -> five
# ->

Upvotes: 398

Dan Lenski
Dan Lenski

Reputation: 79762

Apparently a cStringIO.StringIO object doesn't quack close enough to a file duck to suit subprocess.Popen

I'm afraid not. The pipe is a low-level OS concept, so it absolutely requires a file object that is represented by an OS-level file descriptor. Your workaround is the right one.

Upvotes: 12

user3064538
user3064538

Reputation:

On Python 3.7+ do this:

my_data = "whatever you want\nshould match this f"
subprocess.run(["grep", "f"], text=True, input=my_data)

and you'll probably want to add capture_output=True to get the output of running the command as a string.

On older versions of Python, replace text=True with universal_newlines=True:

subprocess.run(["grep", "f"], universal_newlines=True, input=my_data)

Upvotes: 7

Daryl Spitzer
Daryl Spitzer

Reputation: 149364

I figured out this workaround:

>>> p = subprocess.Popen(['grep','f'],stdout=subprocess.PIPE,stdin=subprocess.PIPE)
>>> p.stdin.write(b'one\ntwo\nthree\nfour\nfive\nsix\n') #expects a bytes type object
>>> p.communicate()[0]
'four\nfive\n'
>>> p.stdin.close()

Is there a better one?

Upvotes: 50

Graham Christensen
Graham Christensen

Reputation: 849

I'm a bit surprised nobody suggested creating a pipe, which is in my opinion the far simplest way to pass a string to stdin of a subprocess:

read, write = os.pipe()
os.write(write, "stdin input here")
os.close(write)

subprocess.check_call(['your-command'], stdin=read)

Upvotes: 32

Lucien Hercaud
Lucien Hercaud

Reputation: 97

"""
Ex: Dialog (2-way) with a Popen()
"""

p = subprocess.Popen('Your Command Here',
                 stdout=subprocess.PIPE,
                 stderr=subprocess.STDOUT,
                 stdin=PIPE,
                 shell=True,
                 bufsize=0)
p.stdin.write('START\n')
out = p.stdout.readline()
while out:
  line = out
  line = line.rstrip("\n")

  if "WHATEVER1" in line:
      pr = 1
      p.stdin.write('DO 1\n')
      out = p.stdout.readline()
      continue

  if "WHATEVER2" in line:
      pr = 2
      p.stdin.write('DO 2\n')
      out = p.stdout.readline()
      continue
"""
..........
"""

out = p.stdout.readline()

p.wait()

Upvotes: 7

qed
qed

Reputation: 23104

I am using python3 and found out that you need to encode your string before you can pass it into stdin:

p = Popen(['grep', 'f'], stdout=PIPE, stdin=PIPE, stderr=PIPE)
out, err = p.communicate(input='one\ntwo\nthree\nfour\nfive\nsix\n'.encode())
print(out)

Upvotes: 15

Lord Henry Wotton
Lord Henry Wotton

Reputation: 1362

Beware that Popen.communicate(input=s)may give you trouble ifsis too big, because apparently the parent process will buffer it before forking the child subprocess, meaning it needs "twice as much" used memory at that point (at least according to the "under the hood" explanation and linked documentation found here). In my particular case,swas a generator that was first fully expanded and only then written tostdin so the parent process was huge right before the child was spawned, and no memory was left to fork it:

File "/opt/local/stow/python-2.7.2/lib/python2.7/subprocess.py", line 1130, in _execute_child self.pid = os.fork() OSError: [Errno 12] Cannot allocate memory

Upvotes: 6

gedwarp
gedwarp

Reputation: 

p = Popen(['grep', 'f'], stdout=PIPE, stdin=PIPE, stderr=STDOUT)    
p.stdin.write('one\n')
time.sleep(0.5)
p.stdin.write('two\n')
time.sleep(0.5)
p.stdin.write('three\n')
time.sleep(0.5)
testresult = p.communicate()[0]
time.sleep(0.5)
print(testresult)

Upvotes: 2

Michael Waddell
Michael Waddell

Reputation: 289

from subprocess import Popen, PIPE
from tempfile import SpooledTemporaryFile as tempfile
f = tempfile()
f.write('one\ntwo\nthree\nfour\nfive\nsix\n')
f.seek(0)
print Popen(['/bin/grep','f'],stdout=PIPE,stdin=f).stdout.read()
f.close()

Upvotes: 11

Related Questions