CODEWITHSUNDEEP
linuxenthought
user2371845
user2371845

Reputation: 1

canopy linux running error: missing libmkl_intel_lp64.so

I am a paid user and I have installed canopy on a red hat server and got the virtual environment configured. In the virtual env, python is the one contained in the environment: 

    (User) $ which python
    ~/Enthought/Canopy_64bit/User/bin/python

But when I cannot import "numpy" from python: 

    (User) $ python
    Enthought Canopy Python 2.7.3 | 64-bit | (default, Mar 25 2013, 15:55:17)
    [GCC 4.1.2 20080704 (Red Hat 4.1.2-52)] on linux2
    Type "help", "copyright", "credits" or "license" for more information.
    >>> import numpy
    Traceback (most recent call last):
      File "<stdin>", line 1, in <module>
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/__init__.py", line 148, in <module>
        import add_newdocs
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in <module>
        from numpy.lib import add_newdoc
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in <module>
        from polynomial import *
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 17, in <module>
        from numpy.linalg import eigvals, lstsq
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 48, in <module>
        from linalg import *
      File "/usr/lib/canopy/appdata/canopy-1.0.0.1160.rh5-x86_64/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 23, in <module>
        from numpy.linalg import lapack_lite
    **ImportError: libmkl_intel_lp64.so: cannot open shared object file: No such file or directory**

I tried to update numpy with enpkg, but the above error still shows up when importing numpy. 

    (User) $ enpkg numpy
    prefix: /home/wchen06/canopy_virtual
    MKL-10.3-1.egg                                                     [fetching]
     74.60 MB [.................................................................]
    numpy-1.6.1-5.egg                                                  [fetching]
      3.33 MB [.................................................................]
    MKL-10.3-1.egg                                                   [installing]
    248.04 MB [.................................................................]
    numpy-1.6.1-5.egg                                                [installing]
     11.20 MB [.................................................................]

Please help.

Upvotes: 0

Views: 1464

Answers (1)

Jonathan March
Jonathan March

Reputation: 5810

Sorry for the late reply! This is due to a bug in Canopy 1.0.0 (beta) for Linux. For a workaround, please see https://support.enthought.com/entries/21656595-ImportError-libmkl-intel-lp64-so-cannot-open-shared-object-file

Upvotes: 1

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