CODEWITHSUNDEEP
rioparallel-processing
Corvus
Corvus

Reputation: 8059

How can I `print` or `cat` when using parallel

If I call a function using parSapply then print, message or cat statements inside that function don't seem to output to the console.

My process takes a very long time, so I need some way of seeing the progress and getting the results output as they are done. Are there any special commands that would allow me to print to the console from a parallel process?

Example:

library(parallel)

oneloop = function(x) {
  for(i in 1:50) {
    a = rnorm(100000)
    a = sort(a)
  }
  print(x)
  message(x)
  cat(x)
}

cl <- makeCluster(5)
output = parSapply(cl, 1:10, oneloop)
stopCluster(cl)

Upvotes: 54

Views: 15315

Answers (2)

Daisuke Aramaki
Daisuke Aramaki

Reputation: 334

I am using makeCluster with outfile on Windows with doParallel package version 1.0.8. I'm able to tail outfile using a simple Powershell command powershell Get-Content c:/path/to/log/mylog.txt -wait. Works for me.

Upvotes: 4

eddi
eddi

Reputation: 49448

Using outfile param in makeCluster you can redirect the output to a file and then check that file to see how your program progresses.

Interestingly on a Linux machine setting it to "" outputs to the console, but that doesn't work for me on a Windows machine. File output works on both.

Upvotes: 50

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