CODEWITHSUNDEEP
matlabsimilaritycosine-similarity
sima412
sima412

Reputation: 255

How to obtain complexity cosine similarity in Matlab?

I have implemented cosine similarity in Matlab like this. In fact, I have a two-dimensional 50-by-50 matrix. To obtain a cosine should I compare items in a line by line form.

for j = 1:50
    x = dat(j,:);
    for i = j+1:50
        y = dat(i,:);
        c = dot(x,y);
        sim = c/(norm(x,2)*norm(y,2));
    end
end

Is this correct? and The question is this: wath is the complexity or O(n) in this state?

Upvotes: 0

Views: 2800

Answers (2)

gevang
gevang

Reputation: 5014

Just a note on an efficient implementation of the same thing using vectorized and matrix-wise operations (which are optimized in MATLAB). This can have huge time savings for large matrices: 

dat = randn(50, 50);

OP (double-for) implementation:

sim = zeros(size(dat));
nRow = size(dat,1);
for j = 1:nRow
    x = dat(j, :);
    for i = j+1:nRow
        y = dat(i, :);
        c = dot(x, y);
        sim(j, i) = c/(norm(x,2)*norm(y,2));
    end
end

Vectorized implementation:

normDat = sqrt(sum(dat.^2, 2));           % L2 norm of each row 
datNorm = bsxfun(@rdivide, dat, normDat); % normalize each row 
dotProd = datNorm*datNorm';               % dot-product vectorized (redundant!) 
sim2 = triu(dotProd, 1);                  % keep unique upper triangular part

Comparisons for 1000 x 1000 matrix: (MATLAB 2013a, x64, Intel Core i7 960 @ 3.20GHz) 

Elapsed time is 34.103095 seconds.
Elapsed time is 0.075208 seconds.
sum(sum(sim-sim2))
ans =
    -1.224314766369880e-14

Upvotes: 2

Melanchtron
Melanchtron

Reputation: 74

Better end with 49. Maybe you should also add an index to sim?

for j = 1:49
  x = dat(j,:);
  for i = j+1:50
      y = dat(i,:);
      c = dot(x,y);
      sim(j) = c/(norm(x,2)*norm(y,2));
  end
end

The complexity should be roughly like o(n^2), isn't it? Maybe you should have a look at correlation functions ... I don't get what you want to write exactly, but it looks like you want to do something similar. There are built-in correlation functions in Matlab.

Upvotes: 1

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