Reputation: 153581
Suppose I have a data.frame a
(each observation is in a row) and calculated the distance matrix. the question is, is there any function that will give the distances of observation 5 to all the other observations.
> a=data.frame(A=rnorm(10), B=rnorm(10), C=rnorm(10))
> b=dist(a)
> b
1 2 3 4 5 6 7 8 9
2 1.6118634
3 0.4891468 1.3382692
4 1.2002947 1.7516061 0.9160975
5 1.8128570 0.3197837 1.5192406 1.7709168
6 0.7280433 1.2628696 0.4063128 1.2411639 1.4971098
7 1.7616767 0.7400666 1.4512844 1.4355922 0.5168996 1.5524980
8 3.1033274 3.3739578 2.7297046 2.2281075 3.3693333 2.7738859 3.1216145
9 2.0916857 1.6749526 1.6717408 2.0293415 1.8196557 1.3704288 1.9824870 2.4013682
10 1.5949320 1.7309838 1.1680365 0.6331770 1.7255615 1.3234977 1.4333926 1.7798153 1.6126823
Upvotes: 1
Views: 449
Reputation: 6669
Check out the pdist package. It basically returns a single row of what as.matrix(dist(x)) would return... so you don't have to calculate everything.
http://cran.r-project.org/web/packages/pdist/index.html
Upvotes: 0