Reputation: 223
def fillblast(sequentie, titel_lijst, score_lijst, e_lijst, iden_lijst, pos_lijst, gaps_lijst):
conn = mysql.connector.connect(host = "ithurtswhenip.nl", user = "pg2", password = "pg2", database= "pg2", port= "3307")
cursor = conn.cursor()
Blast = 1000
for i in range(0,len(titel_lijst)):
Blast =+ 2
cursor.execute("INSERT INTO `pg2`.`Blast` (`Blast_id`, `Blast_seq`, `Blast_titel`, `Blast_score`, `Blast_E`, `Blast_gaps`, `Blast_pos`, `Blast_iden`) VALUES (%s, %s, %s, %s, %s, %s, %s, %s);", (Blast, sequentie[i] ,titel_lijst[i], score_lijst[i], e_lijst[i], iden_lijst[i], pos_lijst[i], gaps_lijst[i]))
print("1 record toegevoegd")
cursor.commit()
cursor.close()
conn.close()
I get the following error:
AttributeError: 'MySQLCursor' object has no attribute 'commit'
How does it come, and where does it go wrong? I try to connect with MySQLWorkbench.
EDIT:
Now I get the following error:
mysql.connector.errors.DatabaseError: 1205 (HY000): Lock wait timeout exceeded; try restarting transaction
Upvotes: 18
Views: 59341
Reputation: 1846
While fixing some legacy code (that apparently hasn't been working for a couple of years, so users stopped trying to use it), we ran into the same error, using the MySQL-python package in Django. Using the suggestions on this and other answers however resulted in a different error, on account of it occurring within the Django ORM:
django.db.transaction.TransactionManagementError: This code isn't under transaction management
So for those who run into this error after using conn.commit() instead of cursor.commit(), you may be able to use enter_transaction_management
and leave_transaction_management
(note that this was for Django 1.4.6 and MySQL-python 1.2.5; I may have to update this once we get the Django upgrade completed):
try:
conn.enter_transaction_management()
cursor = conn.cursor()
cursor.execute(sql)
conn.commit()
except DatabaseError as e:
cursor.rollback()
log.warning('log warning here')
# Handle other exceptions here.
finally:
if cursor:
cursor.close()
conn.leave_transaction_management()
Upvotes: 1
Reputation: 18727
Because you can not commit a cursor! you must commit the connection.
# cursor.commit() --> This is wrong!
conn.commit() # This is right
Upvotes: 62