Reputation: 2513
I work on an old list names. The names of people are written differently but in reality, these are the same people. I used the stringdist package to compute the distance between strings to find wich names are probably the same.
A small example of my data:
data <- data.frame(column1 = c("Lalande, Pierre","Lalande, P","Tertre, Girard ","Tertre Girard du"),
column2 = c(4, 5, 10, 1))
What it gives:
column1 column2
Lalande, Pierre 4
Lalande, P 5
Tertre, Girard 10
Tertre Girard du 1
What I tried: using stringdist package
library (stringdist)
distance <- stringdistmatrix(data$column1,
useNames="strings",
method="lv")
distance2 = as.matrix(distance)
Distance <5: quasi equal strings
Lalande, Pierre Lalande, P Tertre, Girard
Lalande, P 5
Tertre, Girard 11 13
Tertre Girard du 14 15 3
Reshaping
library(reshape2)
out <- unique(melt(distance2))
What it gives:
Var1 Var2 value
1 Lalande, Pierre Lalande, Pierre 0
2 Lalande, P Lalande, Pierre 5
3 Tertre, Girard Lalande, Pierre 11
4 Tertre Girard du Lalande, Pierre 14
5 Lalande, Pierre Lalande, P 5
6 Lalande, P Lalande, P 0
7 Tertre, Girard Lalande, P 13
8 Tertre Girard du Lalande, P 15
9 Lalande, Pierre Tertre, Girard 11
10 Lalande, P Tertre, Girard 13
11 Tertre, Girard Tertre, Girard 0
12 Tertre Girard du Tertre, Girard 3
13 Lalande, Pierre Tertre Girard du 14
14 Lalande, P Tertre Girard du 15
15 Tertre, Girard Tertre Girard du 3
16 Tertre Girard du Tertre Girard du 0
keeping only the good lines:
out2 <- out %>%
filter (value>0 & value<5)
out2
final but without my column 3!
Var1 Var2 value
1 Tertre Girard du Tertre, Girard 3
2 Tertre, Girard Tertre Girard du 3
How can do this? (summing my original data.frame column2 values)
Var1 Var2 Column3(summing)
Lalande, Pierre Lalande, P 9
Tertre, Girard Tertre Girard du 11
Upvotes: 1
Views: 168
Reputation: 1553
I'm sure there is a cleaner way of doing this, but this works in base R.
data <- data.frame(column1 = c("Lalande, Pierre","Lalande, P","Tertre, Girard ","Tertre Girard du"),
column2 = c(4, 5, 10, 1))
create a column based on pattern match
data$column3 <- gsub(",.*| .*", "", data$column1)
here the x part of the merge we are unstacking and transforming columns 1 and 3
for the y part of the merge we aggregate by the match column 3
x and y are merged by the respective match columns
merge(t(unstack(data[c(1,3)])),aggregate(data$column2, by=list(gsub(",.*| .*", "", data$column1)), FUN=sum), by.x = "row.names", by.y = "Group.1")
Upvotes: 1