CODEWITHSUNDEEP
pythonwindowsscipyseaborncx-freeze
Niko Fohr
Niko Fohr

Reputation: 33920

cx_Freeze and seaborn - ImportError: No module named 'scipy.spatial.ckdtree'

Problem

For some reason when importing the seaborn package, and making an executable (.exe) will give following ImportError. How to troubleshoot this?

Traceback (most recent call last):
  File "C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\lib\site-packages\cx_Fr
eeze\initscripts\__startup__.py", line 12, in <module>
    __import__(name + "__init__")
  File "C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\lib\site-packages\cx_Fr
eeze\initscripts\Console.py", line 21, in <module>
    scriptModule = __import__(moduleName)
  File "GUI.py", line 22, in <module>
    import seaborn as sns
  File "C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\lib\site-packages\seabo
rn\__init__.py", line 9, in <module>
    from .linearmodels import *
  File "C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\lib\site-packages\seabo
rn\linearmodels.py", line 8, in <module>
    from scipy.spatial import distance
  File "C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\lib\site-packages\scipy
\spatial\__init__.py", line 93, in <module>
    from .ckdtree import *
ImportError: No module named 'scipy.spatial.ckdtree'

Additional Information

Setup

setup.py:

import os
import sys
from cx_Freeze import setup, Executable

os.environ['TCL_LIBRARY'] = r"C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\tcl\tcl8.6" 
os.environ['TK_LIBRARY'] = r"C:\WinPython-64bit-3.5.2.3Qt5\python-3.5.2.amd64\tcl\tk8.6" 

base = None

options = {
    'build_exe': {
        'excludes': ['gtk', 'PyQt4', 'Tkinter'],
        'packages': ['scipy'],
        'includes': ['scipy.spatial.ckdtree'],
    }
}


executables = [
    Executable('GUI.py', base=base)
]



setup(name='GUI',
      version='0.1',
      description='GUI test',
      executables=executables,
      options=options
      )

Upvotes: 3

Views: 3081

Answers (1)

kai06046
kai06046

Reputation: 292

Try renaming cKDTree.cp35-win_amd64.pyd to ckdtree.cp35-win_amd64.pyd. This works for my case.

The file shoudld be under your build path, such as build\exe.win-amd64-3.5\scipy\spatial\.

Upvotes: 6

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