CODEWITHSUNDEEP
spring-bootamazon-elastic-beanstalkmysql-connectorflyway
Michal
Michal

Reputation: 644

Flyway not working on Amazon Elasticbeanstalk

I'm testing my spring boot application on amazon elasticbeanstalk and it is not working together with flyway. When I deploy application on local tomcat (or run using spring boot), everything is working. Also when I disable flyway (property flyway.enabled=false), application is working on aws.
But with flyway enabled, application deploy fails with following exception:

2016-12-30 09:52:12.036 DEBUG 10656 --- [ost-startStop-1] o.f.core.internal.command.DbSchemas      : Schema `ebdb` already exists. Skipping schema creation.
2016-12-30 09:52:12.056  WARN 10656 --- [ost-startStop-1] ationConfigEmbeddedWebApplicationContext : Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'flywayInitializer' defined in class path resource [org/springframework/boot/autoconfigure/flyway/FlywayAutoConfiguration$FlywayConfiguration.class]: Invocation of init method failed; nested exception is org.flywaydb.core.api.FlywayException: Unable to check whether schema `ebdb` is empty
2016-12-30 09:52:12.074  WARN 10656 --- [ost-startStop-1] o.s.boot.SpringApplication               : Error handling failed (Error creating bean with name 'delegatingApplicationListener' defined in class path resource [org/springframework/security/config/annotation/web/configuration/WebSecurityConfiguration.class]: BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.annotation.ProxyTransactionManagementConfiguration': Initialization of bean failed; nested exception is org.springframework.beans.factory.NoSuchBeanDefinitionException: No bean named 'org.springframework.context.annotation.ConfigurationClassPostProcessor.importRegistry' available)
2016-12-30 09:52:12.100 ERROR 10656 --- [ost-startStop-1] o.s.boot.SpringApplication               : Application startup failed

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'flywayInitializer' defined in class path resource [org/springframework/boot/autoconfigure/flyway/FlywayAutoConfiguration$FlywayConfiguration.class]: Invocation of init method failed; nested exception is org.flywaydb.core.api.FlywayException: Unable to check whether schema `ebdb` is empty
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1583) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:553) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:296) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081) ~[spring-context-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856) ~[spring-context-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542) ~[spring-context-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:761) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:371) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:315) ~[spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86) [spring-boot-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169) [spring-web-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5303) [catalina.jar:8.0.39]
    at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145) [catalina.jar:8.0.39]
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:753) [catalina.jar:8.0.39]
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:729) [catalina.jar:8.0.39]
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:717) [catalina.jar:8.0.39]
    at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1092) [catalina.jar:8.0.39]
    at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1834) [catalina.jar:8.0.39]
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) [na:1.8.0_111]
    at java.util.concurrent.FutureTask.run(FutureTask.java:266) [na:1.8.0_111]
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_111]
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_111]
    at java.lang.Thread.run(Thread.java:745) [na:1.8.0_111]
Caused by: org.flywaydb.core.api.FlywayException: Unable to check whether schema `ebdb` is empty
    at org.flywaydb.core.internal.dbsupport.Schema.empty(Schema.java:95) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.Flyway$1.execute(Flyway.java:1021) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.Flyway$1.execute(Flyway.java:1006) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.Flyway.execute(Flyway.java:1418) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.Flyway.migrate(Flyway.java:1006) ~[flyway-core-3.2.1.jar:na]
    at org.springframework.boot.autoconfigure.flyway.FlywayMigrationInitializer.afterPropertiesSet(FlywayMigrationInitializer.java:66) ~[spring-boot-autoconfigure-1.4.2.RELEASE.jar:1.4.2.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1642) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1579) ~[spring-beans-4.3.4.RELEASE.jar:4.3.4.RELEASE]
    ... 31 common frames omitted
Caused by: java.sql.SQLException: Cannot proceed because system tables used by Event Scheduler were found damaged at server start
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:964) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3970) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.nextRowFast(MysqlIO.java:2108) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.nextRow(MysqlIO.java:1982) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.readSingleRowSet(MysqlIO.java:3397) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.getResultSet(MysqlIO.java:470) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.readResultsForQueryOrUpdate(MysqlIO.java:3109) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.readAllResults(MysqlIO.java:2334) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2733) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2549) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:1861) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1962) ~[mysql-connector-java-5.1.40.jar:5.1.40]
    at org.flywaydb.core.internal.dbsupport.JdbcTemplate.queryForInt(JdbcTemplate.java:156) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.internal.dbsupport.mysql.MySQLSchema.doEmpty(MySQLSchema.java:49) ~[flyway-core-3.2.1.jar:na]
    at org.flywaydb.core.internal.dbsupport.Schema.empty(Schema.java:93) ~[flyway-core-3.2.1.jar:na]
    ... 38 common frames omitted

30-Dec-2016 09:52:12.105 SEVERE [localhost-startStop-1] org.apache.catalina.core.ContainerBase.addChildInternal ContainerBase.addChild: start: 
 org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[]]
    at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:162)
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:753)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:729)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:717)
    at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1092)
    at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1834)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'flywayInitializer' defined in class path resource [org/springframework/boot/autoconfigure/flyway/FlywayAutoConfiguration$FlywayConfiguration.class]: Invocation of init method failed; nested exception is org.flywaydb.core.api.FlywayException: Unable to check whether schema `ebdb` is empty
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1583)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:553)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
    at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:296)
    at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1081)
    at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:856)
    at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542)
    at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:122)
    at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:761)
    at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:371)
    at org.springframework.boot.SpringApplication.run(SpringApplication.java:315)
    at org.springframework.boot.web.support.SpringBootServletInitializer.run(SpringBootServletInitializer.java:151)
    at org.springframework.boot.web.support.SpringBootServletInitializer.createRootApplicationContext(SpringBootServletInitializer.java:131)
    at org.springframework.boot.web.support.SpringBootServletInitializer.onStartup(SpringBootServletInitializer.java:86)
    at org.springframework.web.SpringServletContainerInitializer.onStartup(SpringServletContainerInitializer.java:169)
    at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5303)
    at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:145)
    ... 10 more
Caused by: org.flywaydb.core.api.FlywayException: Unable to check whether schema `ebdb` is empty
    at org.flywaydb.core.internal.dbsupport.Schema.empty(Schema.java:95)
    at org.flywaydb.core.Flyway$1.execute(Flyway.java:1021)
    at org.flywaydb.core.Flyway$1.execute(Flyway.java:1006)
    at org.flywaydb.core.Flyway.execute(Flyway.java:1418)
    at org.flywaydb.core.Flyway.migrate(Flyway.java:1006)
    at org.springframework.boot.autoconfigure.flyway.FlywayMigrationInitializer.afterPropertiesSet(FlywayMigrationInitializer.java:66)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1642)
    at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1579)
    ... 31 more
Caused by: java.sql.SQLException: Cannot proceed because system tables used by Event Scheduler were found damaged at server start
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:964)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3970)
    at com.mysql.jdbc.MysqlIO.nextRowFast(MysqlIO.java:2108)
    at com.mysql.jdbc.MysqlIO.nextRow(MysqlIO.java:1982)
    at com.mysql.jdbc.MysqlIO.readSingleRowSet(MysqlIO.java:3397)
    at com.mysql.jdbc.MysqlIO.getResultSet(MysqlIO.java:470)
    at com.mysql.jdbc.MysqlIO.readResultsForQueryOrUpdate(MysqlIO.java:3109)
    at com.mysql.jdbc.MysqlIO.readAllResults(MysqlIO.java:2334)
    at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2733)
    at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2549)
    at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:1861)
    at com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1962)
    at org.flywaydb.core.internal.dbsupport.JdbcTemplate.queryForInt(JdbcTemplate.java:156)
    at org.flywaydb.core.internal.dbsupport.mysql.MySQLSchema.doEmpty(MySQLSchema.java:49)
    at org.flywaydb.core.internal.dbsupport.Schema.empty(Schema.java:93)
    ... 38 more

30-Dec-2016 09:52:12.109 SEVERE [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Error deploying web application directory /var/lib/tomcat8/webapps/ROOT
 java.lang.IllegalStateException: ContainerBase.addChild: start: org.apache.catalina.LifecycleException: Failed to start component [StandardEngine[Catalina].StandardHost[localhost].StandardContext[]]
    at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:757)
    at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:729)
    at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:717)
    at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1092)
    at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1834)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

It looks like there is a problem with mysql connector. I have tried to create new environments on aws and many property combinations, but nothing worked.

My env: Java 8, Tomcat 8.0.39, MySQL Connector 5.1.40, Spring Boot 1.4.2, Flyway 3.2.1. / 4.0.3

Thanks

Upvotes: 1

Views: 1055

Answers (1)

Michal
Michal

Reputation: 644

I have found the solution - the problem is in parameter event_scheduler, which is by default on aws rds database instance set to DISABLED. It seems to be an incorrect value for this parameter, because it should be only ON or OFF. So I have created new parameter group with this parameter set to OFF and modified my db instance to use this new parameter group. After this change my application has been deployed successfully.

Upvotes: 6

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