CODEWITHSUNDEEP
rstatisticspoissonfitdistrplus
CPR
CPR

Reputation: 11

Error in fitting a zero inflated poisson distribution in R

I'm a R beginner trying to fit a ZIP:

set.seed(5695)
a<-c(rep(0,250),rpois(n=750,lambda=2))
fpoisZI <- fitdist(a, "ZIP", start=list(sigma=sum(a == 0)/length(a), mu=mean(a)))

I think this code should be ok, but then it appears an error message:

The dZIP function must be defined

Any idea about what am I doing wrong?

Upvotes: 1

Views: 541

Answers (1)

Sandipan Dey
Sandipan Dey

Reputation: 23101

For Zero inflated poisson distribution for fitting a ZIP model, you need the library gamlss.dist. if not installed, install it using install.packages('gamlss.dist'). Then the following code should work:

library(fitdistrplus)
library(gamlss.dist)
set.seed(5695)
a<-c(rep(0,250),rpois(n=750,lambda=2))
fpoisZI <- fitdist(a, "ZIP", start=list(sigma=sum(a == 0)/length(a), mu=mean(a)))
summary(fpoisZI)
#Fitting of the distribution ' ZIP ' by maximum likelihood 
#Parameters : 
#       estimate Std. Error
#sigma 0.2465825 0.01912744
#mu    1.9672566 0.06196681
#Loglikelihood:  -1621.389   AIC:  3246.777   BIC:  3256.593 
#Correlation matrix:
#          sigma        mu
#sigma 1.0000000 0.3968521
#mu    0.3968521 1.0000000

Upvotes: 1

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