Reputation: 311
I am using the python module called PyAthenaJDBC in order to query Athena using the provided JDBC driver. Here is the link : https://pypi.python.org/pypi/PyAthenaJDBC/
I have been facing some persistent issue. I keep getting this java error whenever I use the Athena connection twice in a row.
As a matter of fact, I was able to connect to Athena, show databases, create new tables and even query the content. I am building an application using Django and running its server to use Athena However, I am obliged to re-run the server in order for the Athena connection to work once again,
Here is a glimpse of the class I have built
import os
import configparser
import pyathenajdbc
#Get aws credentials for the moment
aws_config_file = '~/.aws/config'
Config = configparser.ConfigParser()
Config.read(os.path.expanduser(aws_config_file))
access_key_id = Config['default']['aws_access_key_id']
secret_key_id = Config['default']['aws_secret_access_key']
BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
athena_jdbc_driver_path = BASE_DIR + "/lib/static/AthenaJDBC.jar"
log_path = BASE_DIR + "/lib/static/queries.log"
class PyAthenaLoader():
def __init__(self):
pyathenajdbc.ATHENA_JAR = athena_jdbc_driver_path
def connecti(self):
self.conn = pyathenajdbc.connect(
s3_staging_dir="s3://aws-athena-query-results--us-west-2",
access_key=access_key_id,
secret_key=secret_key_id,
#profile_name = "default",
#credential_file = aws_config_file,
region_name="us-west-2",
log_path=log_path,
driver_path=athena_jdbc_driver_path
)
def databases(self):
dbs = self.query("show databases;")
return dbs
def tables(self, database):
tables = self.query("show tables in {0};".format(database))
return tables
def create(self):
self.connecti()
try:
with self.conn.cursor() as cursor:
cursor.execute(
"""CREATE EXTERNAL TABLE IF NOT EXISTS sales4 (
Day_ID date,
Product_Id string,
Store_Id string,
Sales_Units int,
Sales_Cost float,
Currency string
)
ROW FORMAT SERDE 'org.apache.hadoop.hive.serde2.lazy.LazySimpleSerDe'
WITH SERDEPROPERTIES (
'serialization.format' = '|',
'field.delim' = '|',
'collection.delimm' = 'undefined',
'mapkey.delim' = 'undefined'
) LOCATION 's3://athena-internship/';
""")
res = cursor.description
finally:
self.conn.close()
return res
def query(self, req):
self.connecti()
try:
with self.conn.cursor() as cursor:
cursor.execute(req)
print(cursor.description)
res = cursor.fetchall()
finally:
self.conn.close()
return res
def info(self):
res = []
for i in dir(pyathenajdbc):
temp = i + ' = ' + str(dic[i])
#print(temp)
res.append(temp)
return res
Example of usage :
def test(request):
athena = jdbc.PyAthenaLoader()
res = athena.query('Select * from sales;')
return render(request, 'test.html', {'data': res})
Works just fine! However refreshing the page would cause this error :
Note that I am using a local .jar file: I thought that would solve the issue but I was wrong Even if I remove the path of the JDBC driver and let the module download it from s3, the error persists:
File "/home/tewfikghariani/.virtualenvs/venv/lib/python3.4/site-packages/pyathenajdbc/connection.py", line 69, in init ATHENA_CONNECTION_STRING.format(region=self.region_name, schema=schema_name), props) jpype._jexception.java.sql.SQLExceptionPyRaisable: java.sql.SQLException: No suitable driver found for jdbc:awsathena://athena.us-west-2.amazonaws.com:443/hive/default/
Furthermore, when I run the module on its own, it works just fine. When I set multiple connection inside my view before rendering the template, that works just fine as well.
I guess the issue is related to the django view, once one of the views is performing a connection with athena, the next connection is not possible anymore and the error is raised unless I restart the server
Any help? If other details are missing I will provide them immediately.
Upvotes: 2
Views: 1007
Reputation: 311
Update: After posting the issue in github, the author solved this problem and released a new version that works perfectly. It was a multi-threading problem with JPype.
Question answered!
ref : https://github.com/laughingman7743/PyAthenaJDBC/pull/8
Upvotes: 2