CODEWITHSUNDEEP
rgraphvizdiagrammer
Ricardo Pietrobon
Ricardo Pietrobon

Reputation: 858

DiagrammeR and graphviz

I am trying to reproduce the flow diagram from:

http://www.consort-statement.org/consort-statement/flow-diagram

using the DiagrammeR package from R. Below is where I got so far, but I can't get the "excluded" box to be horizontally aligned with the blank node. Any suggestions?

```{r, echo=FALSE, warning=FALSE, results='hide', message=FALSE}
 
library(pacman)
p_load(DiagrammeR)
 
grViz("digraph a_nice_graph { 
  node [fontname = Helvetica, shape = box, width = 4, fillcolor = LightSalmon, style = filled]
  assessed [label = 'Assessed for Elibibility (n = )']
  randomized [label = 'Randomized (n = )']
  allocatedA [label = 'Allocated to intervention A (n = )']
  allocatedB [label = 'Allocated to intervention B (n = )']
  lostA [label = 'Lost to follow-up (n = )']
  lostB [label = 'Lost to follow-up (n = )']
  analyzedA [label = 'Analyzed (n = )']
  analyzedB [label = 'Analyzed (n = )']
  blank[label = '', width = 0.01, height = 0.01]
  excluded[label = 'Excluded (n = )']

  subgraph cluster_0 {
    rankdir = TD
    color = white
    assessed -> blank [arrowhead = none]
    blank -> randomized
  }

  subgraph cluster_1 {
    rankdir = LR
    color = white
    blank -> excluded
  }
 
  randomized -> {allocatedA allocatedB}
  allocatedA -> lostA
  allocatedB -> lostB
  lostA -> analyzedA
  lostB -> analyzedB
}") 
```

Here is the resulting plot thus far:

enter image description here

Upvotes: 4

Views: 1663

Answers (1)

vaettchen
vaettchen

Reputation: 7659

I'm not using RMarkdown but have checked with the browser, I believe this should work "as is" in your setup as well. The point is just putting blank and excluded into the same rank. No need for the subgraphs you have tried:

digraph a_nice_graph
{
    node [fontname = Helvetica, shape = box, width = 4, fillcolor = LightSalmon, style = filled]
    assessed [label = 'Assessed for Elibibility (n = )']
    randomized [label = 'Randomized (n = )']
    allocatedA [label = 'Allocated to intervention A (n = )']
    allocatedB [label = 'Allocated to intervention B (n = )']
    lostA [label = 'Lost to follow-up (n = )']
    lostB [label = 'Lost to follow-up (n = )']
    analyzedA [label = 'Analyzed (n = )']
    analyzedB [label = 'Analyzed (n = )']
    blank[label = '', width = 0.01, height = 0.01]
    excluded[label = 'Excluded (n = )']

    { rank = same; blank excluded }

    assessed -> blank[ dir = none ];
    blank -> excluded[ minlen = 3 ];
    blank -> randomized;
    randomized -> {allocatedA allocatedB};
    allocatedA -> lostA;
    allocatedB -> lostB;
    lostA -> analyzedA;
    lostB -> analyzedB;
}

yields

enter image description here

Upvotes: 5

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