CODEWITHSUNDEEP
rlibxml2bioconductor
Ilona
Ilona

Reputation: 476

How to install libxml2 package in R if it's not available for my version?

I wanted to install "DESeq2" package in R, but it was missing the xml2-config file. I found somewhere that it can be obtained by installing the libxml2 package, but when I tried it gives error that it's not available for R version 3.4.2. Anyone has idea what to do?

Upvotes: 2

Views: 9739

Answers (2)

Ilona
Ilona

Reputation: 476

After running what @amarchin wrote it didn't work instantly but R suggested to install libxml2-dev. So I run: sudo apt-get install libxml2-dev in Terminal. And then in R console I typed the code from @amarchin: devtools::install_github("r-lib/xml2") And it worked :)

Upvotes: 3

amarchin
amarchin

Reputation: 2114

You can install the dev version: devtools::install_github("r-lib/xml2")

Upvotes: 3

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