CODEWITHSUNDEEP
cluster-computingpbsqsubsungridengine
justakidd
justakidd

Reputation: 21

SGE scheduler- how to print requested resource of an ended job?

I just forget how much memory I requested for a job which has ended. It seems to me that the memory I requested is not enough. I requested the memory by qsub -l h_vmem=?G. Is there any way I can find it (SGE scheduler)? Thank you in advance.

Upvotes: 1

Views: 272

Answers (1)

Vince
Vince

Reputation: 3395

You can use a epilogue script for this. Example script epilogue.sh:

#!/bin/sh
echo "#########################"
echo "Begin PBS Epilogue" `date`
echo "Epilogue Args:"
echo "Job ID: $1"
echo "User ID: $2"
echo "Group ID: $3"
echo "Job Name: $4"
echo "Session ID: $5"
echo "Resource List: $6"
echo "Resources Used: $7"
echo "Queue Name: $8"
echo "Account String: $9"
echo "End PBS Epilogue" `date`
echo "#########################"
exit 0

Example submit script:

#!/bin/bash
#PBS -N test1
#PBS -o logs/
#PBS -e logs/
#PBS -l walltime=00:00:59
#PBS -l nodes=1:ppn=8
#PBS -l mem=6G
#PBS -l vmem=6G
#PBS -l epilogue=/path/to/epilogue.sh

cd $PBS_O_WORKDIR

mkdir -p logs/

<some code to run here>

Note the line:

#PBS -l epilogue=/path/to/epilogue.sh

This tell the job to run epilogue.sh when the job completes. The output of epilogue.sh will appear in the standard output log file.

Upvotes: 1

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