Streaming MutationGroups into Spanner

Question

I'm trying to stream MutationGroups into spanner with SpannerIO. The goal is to write new MuationGroups every 10 seconds, as we will use spanner to query near-time KPI's.

When I don't use any windows, I get the following error:

Exception in thread "main" java.lang.IllegalStateException: GroupByKey cannot be applied to non-bounded PCollection in the GlobalWindow without a trigger. Use a Window.into or Window.triggering transform prior to GroupByKey.
    at org.apache.beam.sdk.transforms.GroupByKey.applicableTo(GroupByKey.java:173)
    at org.apache.beam.sdk.transforms.GroupByKey.expand(GroupByKey.java:204)
    at org.apache.beam.sdk.transforms.GroupByKey.expand(GroupByKey.java:120)
    at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:537)
    at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:472)
    at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:286)
    at org.apache.beam.sdk.transforms.Combine$PerKey.expand(Combine.java:1585)
    at org.apache.beam.sdk.transforms.Combine$PerKey.expand(Combine.java:1470)
    at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:537)
    at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:491)
    at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:299)
    at org.apache.beam.sdk.io.gcp.spanner.SpannerIO$WriteGrouped.expand(SpannerIO.java:868)
    at org.apache.beam.sdk.io.gcp.spanner.SpannerIO$WriteGrouped.expand(SpannerIO.java:823)
    at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:537)
    at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:472)
    at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:286)
    at quantum.base.transform.entity.spanner.SpannerProtoWrite.expand(SpannerProtoWrite.java:52)
    at quantum.base.transform.entity.spanner.SpannerProtoWrite.expand(SpannerProtoWrite.java:20)
    at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:537)
    at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:491)
    at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:299)
    at quantum.entitybuilder.pipeline.EntityBuilderPipeline$Write$SpannerWrite.expand(EntityBuilderPipeline.java:388)
    at quantum.entitybuilder.pipeline.EntityBuilderPipeline$Write$SpannerWrite.expand(EntityBuilderPipeline.java:372)
    at org.apache.beam.sdk.Pipeline.applyInternal(Pipeline.java:537)
    at org.apache.beam.sdk.Pipeline.applyTransform(Pipeline.java:491)
    at org.apache.beam.sdk.values.PCollection.apply(PCollection.java:299)
    at quantum.entitybuilder.pipeline.EntityBuilderPipeline.main(EntityBuilderPipeline.java:122)
:entityBuilder FAILED

Because of the error above I assume the input collection needs to be windowed and triggered, as SpannerIO uses a GroupByKey (this is also what I need for my use case):

        ...
        .apply("1-minute windows", Window.into(FixedWindows.of(Duration.standardMinutes(1)))
            .triggering(Repeatedly.forever(AfterProcessingTime
                    .pastFirstElementInPane()
                    .plusDelayOf(Duration.standardSeconds(10))
            ).orFinally(AfterWatermark.pastEndOfWindow()))
            .discardingFiredPanes()
            .withAllowedLateness(Duration.ZERO))
        .apply(SpannerIO.write()
                    .withProjectId(entityConfig.getSpannerProject())
                    .withInstanceId(entityConfig.getSpannerInstance())
                    .withDatabaseId(entityConfig.getSpannerDb())
                    .grouped());

When I do this, I get the following exceptions during runtime:

java.lang.IllegalArgumentException: Attempted to get side input window for GlobalWindow from non-global WindowFn
        org.apache.beam.sdk.transforms.windowing.PartitioningWindowFn$1.getSideInputWindow(PartitioningWindowFn.java:49)
        com.google.cloud.dataflow.worker.StreamingModeExecutionContext$StepContext.issueSideInputFetch(StreamingModeExecutionContext.java:631)
        com.google.cloud.dataflow.worker.StreamingModeExecutionContext$UserStepContext.issueSideInputFetch(StreamingModeExecutionContext.java:683)
        com.google.cloud.dataflow.worker.StreamingSideInputFetcher.storeIfBlocked(StreamingSideInputFetcher.java:182)
        com.google.cloud.dataflow.worker.StreamingSideInputDoFnRunner.processElement(StreamingSideInputDoFnRunner.java:71)
        com.google.cloud.dataflow.worker.SimpleParDoFn.processElement(SimpleParDoFn.java:323)
        com.google.cloud.dataflow.worker.util.common.worker.ParDoOperation.process(ParDoOperation.java:43)
        com.google.cloud.dataflow.worker.util.common.worker.OutputReceiver.process(OutputReceiver.java:48)
        com.google.cloud.dataflow.worker.SimpleParDoFn$1.output(SimpleParDoFn.java:271)
        org.apache.beam.runners.core.SimpleDoFnRunner.outputWindowedValue(SimpleDoFnRunner.java:219)
        org.apache.beam.runners.core.SimpleDoFnRunner.access$700(SimpleDoFnRunner.java:69)
        org.apache.beam.runners.core.SimpleDoFnRunner$DoFnProcessContext.output(SimpleDoFnRunner.java:517)
        org.apache.beam.runners.core.SimpleDoFnRunner$DoFnProcessContext.output(SimpleDoFnRunner.java:505)
        org.apache.beam.sdk.values.ValueWithRecordId$StripIdsDoFn.processElement(ValueWithRecordId.java:145)

After investigating further it appears to be due to the .apply(Wait.on(input)) in SpannerIO: It has a global side input which does not seem to work with my fixed windows, as the docs of Wait.java state:

If signal is globally windowed, main input must also be. This typically would be useful
 *       only in a batch pipeline, because the global window of an infinite PCollection never
 *       closes, so the wait signal will never be ready.

As a temporary workaround I tried the following:

add a GlobalWindow with triggers instead of fixed windows:

    .apply("globalwindow", Window.into(new GlobalWindows())
            .triggering(Repeatedly.forever(AfterProcessingTime
                    .pastFirstElementInPane()
                    .plusDelayOf(Duration.standardSeconds(10))
            ).orFinally(AfterWatermark.pastEndOfWindow()))
            .discardingFiredPanes()
            .withAllowedLateness(Duration.ZERO))

This results in writes to spanner only when I drain my pipeline. I have the impression the Wait.on() signal is only triggered when the Global windows closes, and doesn't work with triggers.

Disable the .apply(Wait.on(input)) in SpannerIO:

This results in the pipeline getting stuck on the view creation which is described in this SO post: SpannerIO Dataflow 2.3.0 stuck in CreateDataflowView.

When I check the worker logs for clues, I do get the following warnings:

logger:  "org.apache.beam.sdk.coders.SerializableCoder"
message:  "Can't verify serialized elements of type SpannerSchema have well defined equals method. This may produce incorrect results on some PipelineRunner
logger:  "org.apache.beam.sdk.coders.SerializableCoder"   
message:  "Can't verify serialized elements of type BoundedSource have well defined equals method. This may produce incorrect results on some PipelineRunner"

Note that everything works with the DirectRunner and that I'm trying to use the DataflowRunner.

Does anyone have any other suggestions for things I can try to get this running? I can hardly imagine that I'm the only one trying to stream MutationGroups into spanner.

Thanks in advance!

Streaming MutationGroups into Spanner

Answers (1)

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