CODEWITHSUNDEEP
pythonsyntaxanacondabiopython
Jaswant S
Jaswant S

Reputation: 31

How do I install biopython in anaconda?

I get SyntaxError: invalid syntax

while trying to install biopython using the following command.

conda install -c anaconda biopython

Could you please help me install biopython in anaconda (3) ?

Upvotes: 3

Views: 14999

Answers (4)

user23177130
user23177130

Reputation: 1

Team, I want to point out. If you use VS, you can work around any conda issue by going to the appropriated path and use .\pip install biopython

Upvotes: 0

M__
M__

Reputation: 636

Install Anaconda Navigator, go to "Environments" and select the appropriate environment (base or your own) and click "not installed". Scroll down to biopython click the box and then install...

Upvotes: 2

Dmitri
Dmitri

Reputation: 811

Package maintainers recommend using (in the terminal):

conda install -c conda-forge biopython

We deliberately recommend using Biopython from the conda-forge channel, as this is usually up to date and covers Windows, Mac OS X and Linux. The default Conda channel does have Biopython, but is often out of date. https://biopython.org/wiki/Packages

Upvotes: 4

abhilash dasari
abhilash dasari

Reputation: 53

Open the terminal and export your path to anaconda:

export PATH=~/anaconda3/bin:$PATH

Then type:

conda install -c anaconda biopython

Upvotes: 3

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