Reputation: 137
I've a dataset with 18 columns from which I need to return the column names with the highest value(s) for each observation, simple example below. I came across this answer, and it almost does what I need, but in some cases I need to combine the names (like ab
in maxcol
below). How should I do this?
Any suggestions would be greatly appreciated! If it's possible it would be easier for me to understand a tidyverse based solution as I'm more familiar with that than base.
Edit: I forgot to mention that some of the columns in my data have NAs.
library(dplyr, warn.conflicts = FALSE)
#turn this
Df <- tibble(a = 4:2, b = 4:6, c = 3:5)
#into this
Df <- tibble(a = 4:2, b = 4:6, c = 3:5, maxol = c("ab", "b", "b"))
Created on 2018-10-30 by the reprex package (v0.2.1)
Upvotes: 2
Views: 3253
Reputation: 409
Here's a solution I found that loops through column names in case you find it hard to wrap your head around spread/gather (pivot_wider/longer)
out_df <- Df %>%
# calculate rowwise maximum
rowwise() %>%
mutate(rowmax = max(across())) %>%
# create empty maxcol column
mutate(maxcol = "")
# loop through column names
for (colname in colnames(Df)) {
out_df <- out_df %>%
# if the value at the specified column name is the maximum, paste it to the maxcol
mutate(maxcol = ifelse(.data[[colname]] == rowmax, paste0(maxcol, colname), maxcol))
}
# remove rowmax column if no longer needed
out_df <- out_df %>%
select(-rowmax)
Upvotes: 0
Reputation: 388807
Continuing from the answer in the linked post, we can do
Df$maxcol <- apply(Df, 1, function(x) paste0(names(Df)[x == max(x)], collapse = ""))
Df
# a b c maxcol
# <int> <int> <int> <chr>
#1 4 4 3 ab
#2 3 5 4 b
#3 2 6 5 b
For every row, we check which position has max values and paste
the names
at that position together.
If you prefer the tidyverse
approach
library(tidyverse)
Df %>%
mutate(row = row_number()) %>%
gather(values, key, -row) %>%
group_by(row) %>%
mutate(maxcol = paste0(values[key == max(key)], collapse = "")) %>%
spread(values, key) %>%
ungroup() %>%
select(-row)
# maxcol a b c
# <chr> <int> <int> <int>
#1 ab 4 4 3
#2 b 3 5 4
#3 b 2 6 5
We first convert dataframe from wide to long using gather
, then group_by
each row we paste
column names for max
key
and then spread
the long dataframe to wide again.
Upvotes: 5