memo
Reputation: 3714
conda create -n anaconda won't install full anaconda packages
I'd like to create a python3.6 env with default anaconda packages. The manual and many online resources say the command is conda create -n py36 python=3.6 anaconda. On other computers that works, but on one particular computer it only installs very few packages. I can't figure out why. I've checked $HOME/anaconda2/env and there's nothing in there.
(ubuntu 16.04, installed from anaconda, not miniconda)
$ conda update anaconda
Solving environment: done
# All requested packages already installed.
$ conda update conda
Solving environment: done
# All requested packages already installed.
$conda create -n py36 python=3.6 anaconda
Solving environment: done
## Package Plan ##
environment location: /home/memo/anaconda2/envs/py36
added / updated specs:
- anaconda
- python=3.6
The following NEW packages will be INSTALLED:
anaconda: custom-py36hbbc8b67_0
ca-certificates: 2018.10.15-ha4d7672_0 conda-forge
certifi: 2018.10.15-py36_1000 conda-forge
libffi: 3.2.1-hfc679d8_5 conda-forge
libgcc-ng: 7.2.0-hdf63c60_3 conda-forge
libstdcxx-ng: 7.2.0-hdf63c60_3 conda-forge
ncurses: 6.1-hfc679d8_1 conda-forge
openssl: 1.0.2p-h470a237_1 conda-forge
pip: 18.1-py36_1000 conda-forge
python: 3.6.6-h5001a0f_3 conda-forge
readline: 7.0-haf1bffa_1 conda-forge
setuptools: 40.5.0-py36_0 conda-forge
sqlite: 3.25.3-hb1c47c0_0 conda-forge
tk: 8.6.8-ha92aebf_0 conda-forge
wheel: 0.32.2-py36_0 conda-forge
xz: 5.2.4-h470a237_1 conda-forge
zlib: 1.2.11-h470a237_3 conda-forge
Proceed ([y]/n)? n
$ conda list
# packages in environment at /home/memo/anaconda2:
#
# Name Version Build Channel
_ipyw_jlab_nb_ext_conf 0.1.0 py27h08a7f0c_0
absl-py 0.6.1 <pip>
absl-py 0.5.0 <pip>
alabaster 0.7.10 py27he5a193a_0
anaconda custom py27h4a00acb_0
anaconda-client 1.6.9 py27_0
anaconda-navigator 1.8.4 py27_0
anaconda-project 0.8.2 py27h236b58a_0
asn1crypto 0.24.0 py27_0
astor 0.7.1 <pip>
astroid 1.6.1 py27_0
astropy 2.0.3 py27h14c3975_0
attrs 17.4.0 py27_0
audioread 2.1.4 py27_1 conda-forge
babel 2.5.3 py27_0
backports 1.0 py27h63c9359_1
backports.functools_lru_cache 1.4 py27he8db605_1
backports.shutil_get_terminal_size 1.0.0 py27h5bc021e_2
backports.weakref 1.0.post1 <pip>
backports_abc 0.5 py27h7b3c97b_0
beautifulsoup4 4.6.0 py27h3f86ba9_1
bibtexparser 1.0.1 <pip>
bitarray 0.8.1 py27h14c3975_1
bkcharts 0.2 py27h241ae91_0
blas 1.0 mkl
blaze 0.11.3 py27h5f341da_0
bleach 1.5.0 <pip>
bleach 2.1.2 py27_0
blosc 1.14.4 hfc679d8_0 conda-forge
bokeh 0.12.13 py27h5233db4_0
boost 1.59.0 py27_0 menpo
boto 2.48.0 py27h9556ac2_1
bottleneck 1.2.1 py27h21b16a3_0
bzip2 1.0.6 h9a117a8_4
ca-certificates 2018.10.15 ha4d7672_0 conda-forge
cairo 1.14.6 4 conda-forge
cdecimal 2.3 py27h14c3975_3
certifi 2018.10.15 py27_1000 conda-forge
cffi 1.11.4 py27h9745a5d_0
cgal-bindings 1.2 <pip>
chardet 3.0.4 py27hfa10054_1
click 6.7 py27h4225b90_0
cloudpickle 0.5.2 py27_1
clyent 1.2.2 py27h7276e6c_1
colorama 0.3.9 py27h5cde069_0
conda 4.5.11 py27_1000 conda-forge
conda-build 3.4.1 py27_0
conda-env 2.6.0 h36134e3_1
conda-verify 2.0.0 py27hf052a9d_0
configparser 3.5.0 py27h5117587_0
contextlib2 0.5.5 py27hbf4c468_0
cryptography 2.3.1 py27hdffb7b8_0 conda-forge
cryptography-vectors 2.3.1 py27_1000 conda-forge
curl 7.61.0 h93b3f91_2 conda-forge
cycler 0.10.0 py27hc7354d3_0
cython 0.27.3 py27hc56b35e_0
cytoolz 0.9.0 py27h14c3975_0
dask 0.16.1 py27_0
dask-core 0.16.1 py27_0
datashape 0.5.4 py27hf507385_0
dbus 1.13.0 h3a4f0e9_0 conda-forge
decorator 4.3.0 <pip>
decorator 4.2.1 py27_0
distributed 1.20.2 py27_0
dlib 19.16.0 <pip>
dlib 19.4 py27_0 menpo
docopt 0.6.2 <pip>
docutils 0.14 py27hae222c1_0
dominate 2.3.4 <pip>
dxfwrite 1.2.1 <pip>
entrypoints 0.2.3 py27h502b47d_2
enum34 1.1.6 py27h99a27e9_1
enum34 1.1.6 <pip>
et_xmlfile 1.0.1 py27h75840f5_0
expat 2.2.5 he0dffb1_0
fastcache 1.0.2 py27h14c3975_2
ffmpeg 3.1.3 0 menpo
filelock 2.0.13 py27h61a9c69_0
flask 0.12.2 py27h6d5c1cd_0
flask-cors 3.0.3 py27h1a8a27f_0
flickr-api 0.6.1 <pip>
fontconfig 2.12.1 4 conda-forge
freetype 2.7 1 conda-forge
funcsigs 1.0.2 <pip>
funcsigs 1.0.2 py27h83f16ab_0
functools32 3.2.3.2 py27h4ead58f_1
future 0.17.1 py27_0 anaconda
futures 3.2.0 py27h7b459c0_0
futures 3.2.0 <pip>
gast 0.2.0 <pip>
geomstats 1.5 <pip>
get_terminal_size 1.0.0 haa9412d_0
gettext 0.19.8.1 h5e8e0c9_1 conda-forge
gevent 1.2.2 py27h475ea6a_0
glib 2.51.4 0 conda-forge
glob2 0.6 py27hcea9cbd_0
gmp 6.1.2 h6c8ec71_1
gmpy2 2.0.8 py27h4cf3fa8_2
graphite2 1.3.10 hf63cedd_1
greenlet 0.4.12 py27hac09c53_0
grin 1.2.1 py27_4
grpcio 1.15.0 <pip>
grpcio 1.16.0 <pip>
gst-plugins-base 1.8.0 0 conda-forge
gstreamer 1.8.0 1 conda-forge
h5py 2.8.0 <pip>
h5py 2.8.0 py27hb794570_1 conda-forge
harfbuzz 1.4.3 0 conda-forge
hdf5 1.10.2 hc401514_1 conda-forge
heapdict 1.0.0 py27_2
html5lib 0.9999999 <pip>
html5lib 1.0.1 py27h5233db4_0
httplib2 0.11.3 <pip>
icu 58.2 hfc679d8_0 conda-forge
idna 2.6 py27h5722d68_1
idna 2.7 <pip>
imageio 2.4.1 py_0 conda-forge
imagesize 0.7.1 py27hd17bf80_0
imutils 0.5.1 <pip>
intel-openmp 2018.0.0 hc7b2577_8
ipaddress 1.0.19 py27_0
ipykernel 4.8.0 py27_0
ipython 5.4.1 py27_2
ipython_genutils 0.2.0 py27h89fb69b_0
ipywidgets 7.1.1 py27_0
isort 4.2.15 py27hcfa4749_0
itsdangerous 0.24 py27hb8295c1_1
jbig 2.1 hdba287a_0
jdcal 1.3 py27h2cc5433_0
jedi 0.11.1 py27_0
jinja2 2.10 py27h4114e70_0
joblib 0.12.5 py_0 conda-forge
jpeg 9c h470a237_1 conda-forge
jsonschema 2.6.0 py27h7ed5aa4_0
jupyter 1.0.0 py27_4
jupyter_client 5.2.2 py27_0
jupyter_console 5.2.0 py27hc6bee7e_1
jupyter_core 4.4.0 py27h345911c_0
jupyterlab 0.31.5 py27_0
jupyterlab_launcher 0.10.2 py27_0
Keras 2.2.2 <pip>
Keras-Applications 1.0.6 <pip>
Keras-Preprocessing 1.0.5 <pip>
kiwisolver 1.0.1 py27_1 conda-forge
krb5 1.14.6 0 conda-forge
lazy-object-proxy 1.3.1 py27h682c727_0
libcurl 7.61.1 heec0ca6_0
libedit 3.1.20170329 haf1bffa_1 conda-forge
libffi 3.2.1 hd88cf55_4
libgcc 7.2.0 h69d50b8_2 conda-forge
libgcc-ng 8.2.0 hdf63c60_1 anaconda
libgfortran 3.0.0 1
libgfortran-ng 7.2.0 h9f7466a_2
libiconv 1.15 h470a237_3 conda-forge
libopenblas 0.2.20 h9ac9557_7
libopus 1.2.1 hb9ed12e_0
libpng 1.6.34 hb9fc6fc_0
librosa 0.6.2 py_0 conda-forge
libsodium 1.0.15 hf101ebd_0
libssh2 1.8.0 h5b517e9_2 conda-forge
libstdcxx-ng 8.2.0 hdf63c60_1 anaconda
libtiff 4.0.7 1 conda-forge
libtool 2.4.6 h544aabb_3
libuuid 2.32.1 h470a237_2 conda-forge
libvpx 1.6.1 h888fd40_0
libxcb 1.12 hcd93eb1_4
libxml2 2.9.8 h422b904_5 conda-forge
libxslt 1.1.32 h88dbc4e_2 conda-forge
linecache2 1.0.0 py27_0 conda-forge
llvmlite 0.23.0 py27_1 conda-forge
locket 0.2.0 py27h73929a2_1
lws 1.2 <pip>
lxml 4.1.1 py27hdd00cef_0
lzo 2.10 h49e0be7_2
Markdown 3.0.1 <pip>
markupsafe 1.0 py27h97b2822_1
matplotlib 2.1.0 py27_0 conda-forge
mccabe 0.6.1 py27h0e7c7be_1
mido 1.2.9 <pip>
mistune 0.8.3 py27_0
mkl 2018.0.3 1
mkl-service 1.1.2 py27hb2d42c5_4
mkl_fft 1.0.5 py27_0 conda-forge
mkl_random 1.0.1 py27_0 conda-forge
mock 2.0.0 <pip>
moviepy 0.2.3.5 <pip>
mpc 1.0.3 hec55b23_5
mpfr 3.1.5 h11a74b3_2
mpmath 1.0.0 py27h9669132_2
msgpack-python 0.5.1 py27h6bb024c_0
multipledispatch 0.4.9 py27h9b5f95a_0
navigator-updater 0.2.0 py27_0
nbconvert 5.3.1 py27he041f76_0
nbformat 4.4.0 py27hed7f2b2_0
ncurses 6.1 hfc679d8_1 conda-forge
networkx 2.1 py27_0
ninja 1.8.2 h2d50403_1 conda-forge
nltk 3.2.5 py27hec5f4de_0
nose 1.3.7 py27heec2199_2
notebook 5.4.0 py27_0
numba 0.38.1 py27_0 conda-forge
numexpr 2.6.6 py27_0 conda-forge
numpy 1.15.4 <pip>
numpy 1.15.3 py27h1d66e8a_0
numpy 1.14.5 <pip>
numpy-base 1.15.3 py27h81de0dd_0
numpy-stl 2.7.0 <pip>
numpydoc 0.7.0 py27h9647a75_0
oauth2 1.9.0.post1 <pip>
odo 0.5.1 py27h9170de3_0
olefile 0.45.1 py27_0
openblas 0.2.20 8 conda-forge
opencv-contrib-python 3.4.3.18 <pip>
opencv-python 3.4.3.18 <pip>
openpyxl 2.4.10 py27_0
openssl 1.0.2p h470a237_1 conda-forge
packaging 16.8 py27h5e07c7c_1
pandas 0.23.0 py27h637b7d7_0
pandoc 1.19.2.1 hea2e7c5_1
pandocfilters 1.4.2 py27h428e1e5_1
pango 1.40.4 0 conda-forge
parso 0.1.1 py27h718acc2_0
partd 0.3.8 py27h4e55004_0
patchelf 0.9 hf79760b_2
path.py 10.5 py27hefe4bee_0
pathlib2 2.3.0 py27h6e9d198_0
patsy 0.5.0 py27_0
pbr 5.1.0 <pip>
pbr 4.2.0 <pip>
pcre 8.39 1
pep8 1.7.1 py27_0
pexpect 4.3.1 py27_0
pickleshare 0.7.4 py27h09770e1_0
Pillow 5.3.0 <pip>
Pillow 5.2.0 <pip>
pillow 4.3.0 py27_1 conda-forge
pip 9.0.1 py27ha730c48_4
pixman 0.34.0 h470a237_3 conda-forge
pkginfo 1.4.1 py27hee1a9ad_1
pluggy 0.6.0 py27h1f4f128_0
ply 3.10 py27hd6d9ae5_0
plyfile 0.6 <pip>
prompt_toolkit 1.0.15 py27h1b593e1_0
protobuf 3.6.1 <pip>
psutil 5.4.3 py27h14c3975_0
ptyprocess 0.5.2 py27h4ccb14c_0
py 1.5.2 py27h203d672_0
PyAudio 0.2.11 <pip>
pycairo 1.10.0 py27_0
pycodestyle 2.3.1 py27h904819d_0
pycosat 0.6.3 py27ha4109ae_0
pycparser 2.18 py27hefa08c5_1
pycrypto 2.6.1 py27h14c3975_7
pycurl 7.19.0 py27_0 anaconda
pyflakes 1.6.0 py27h904a57d_0
pygame 1.9.4 <pip>
pyglet 1.3.2 <pip>
pygments 2.2.0 py27h4a8b6f5_0
pylint 1.8.2 py27_0
pymesh2 0.2.0 <pip>
pyodbc 4.0.22 py27hf484d3e_0
PyOpenGL 3.1.0 <pip>
pyopenssl 17.5.0 py27hcee3be0_0
pyOSC 0.3.5b5294 <pip>
pyparsing 2.2.0 py27hf1513f8_1
pyqt 5.6.0 py27h8210e8a_7 conda-forge
pyqtgraph 0.10.0 py27h28b3542_3 anaconda
pysocks 1.6.7 py27he2db6d2_1
pytables 3.4.4 py27h4f72b40_1 conda-forge
pytest 3.3.2 py27_0
python 2.7.11 0
python-dateutil 2.6.1 py27h4ca5741_1
python-rtmidi 1.1.2 <pip>
python-utils 2.3.0 <pip>
python-xlib 0.23 <pip>
pytorch 0.4.1 py27__9.0.176_7.1.2_2 pytorch
pytz 2017.3 py27h001bace_0
pywavelets 0.5.2 py27hecda097_0
pyxhook 1.0.0 <pip>
PyYAML 3.13 <pip>
pyyaml 3.12 py27h2d70dd7_1
pyzmq 17.1.0 <pip>
pyzmq 16.0.3 py27hc579512_0
qt 5.6.2 3 conda-forge
qtawesome 0.4.4 py27hd7914c3_0
qtconsole 4.3.1 py27hc444b0d_0
qtpy 1.3.1 py27h63d3751_0
readline 6.2 2
requests 2.19.1 <pip>
requests 2.18.4 py27hc5b0589_1
resampy 0.2.0 py27_1 conda-forge
rope 0.10.7 py27hfe459b0_0
ruamel_yaml 0.15.35 py27h14c3975_1
scandir 1.6 py27hf7388dc_0
scikit-image 0.14.0 py27hf484d3e_1 anaconda
scikit-learn 0.20.0 py27h4989274_1
scipy 1.1.0 <pip>
scipy 1.1.0 py27hfa4b5c9_1
seaborn 0.8.1 py27h633ea1e_0
send2trash 1.4.2 py27_0
setuptools 39.1.0 <pip>
setuptools 38.4.0 py27_0
simplegeneric 0.8.1 py27_2
singledispatch 3.4.0.3 py27h9bcb476_0
sip 4.18 py27_0
six 1.11.0 py27h5f960f1_1
six 1.11.0 <pip>
sk-video 1.1.10 <pip>
smop 0.41 <pip>
snowballstemmer 1.2.1 py27h44e2768_0
sortedcollections 0.5.3 py27h135218e_0
sortedcontainers 1.5.9 py27_0
sphinx 1.6.6 py27_0
sphinxcontrib 1.0 py27h1512b58_1
sphinxcontrib-websupport 1.0.1 py27hf906f22_1
spyder 3.2.6 py27_0
sqlalchemy 1.2.1 py27h14c3975_0
sqlite 3.13.0 1 conda-forge
ssl_match_hostname 3.5.0.1 py27h4ec10b9_2
statsmodels 0.8.0 py27hc87d62d_0
subprocess32 3.2.7 py27h373dbce_0
sympy 1.1.1 py27hc28188a_0
tblib 1.3.2 py27h51fe5ba_0
tensorboard 1.11.0 <pip>
tensorflow-gpu 1.11.0 <pip>
tensorflow-hub 0.1.1 <pip>
tensorflowjs 0.6.1 <pip>
termcolor 1.1.0 <pip>
terminado 0.8.1 py27_1
testpath 0.3.1 py27hc38d2c4_0
tk 8.5.19 2 conda-forge
toolz 0.9.0 py27_0
torchfile 0.1.0 py_0 conda-forge
torchfile 0.1.0 <pip>
torchvision 0.2.1 py27_1 pytorch
tornado 5.1 <pip>
tornado 4.5.3 py27_0
tqdm 4.28.1 py27h28b3542_0 anaconda
traceback2 1.4.0 py27_0 conda-forge
traitlets 4.3.2 py27hd6ce930_0
typing 3.6.2 py27h66f49e2_0
unicodecsv 0.14.1 py27h5062da9_0
unittest2 1.1.0 py_0 conda-forge
unixodbc 2.3.4 hc36303a_1
urllib3 1.22 py27ha55213b_0
urllib3 1.23 <pip>
visdom 0.1.8.4 <pip>
vispy 0.5.3 py27_0 conda-forge
wcwidth 0.1.7 py27h9e3e1ab_0
webencodings 0.5.1 py27hff10b21_1
websocket-client 0.48.0 <pip>
websocket-client 0.48.0 py_0 conda-forge
Werkzeug 0.14.1 <pip>
werkzeug 0.14.1 py27_0
wheel 0.32.2 <pip>
wheel 0.30.0 py27h2bc6bb2_1
wheel 0.32.0 <pip>
widgetsnbextension 3.1.0 py27_0
wrapt 1.10.11 py27h04f6869_0
x264 20131218 0 conda-forge
xlrd 1.1.0 py27ha77178f_1
xlsxwriter 1.0.2 py27h12cbc6b_0
xlwt 1.3.0 py27h3d85d97_0
xorg-kbproto 1.0.7 h470a237_2 conda-forge
xorg-libice 1.0.9 h470a237_4 conda-forge
xorg-libsm 1.2.2 h8c8a85c_6 conda-forge
xorg-libx11 1.6.6 h470a237_0 conda-forge
xorg-libxext 1.3.3 h470a237_4 conda-forge
xorg-libxrender 0.9.10 h470a237_2 conda-forge
xorg-renderproto 0.11.1 h470a237_2 conda-forge
xorg-xextproto 7.3.0 h470a237_2 conda-forge
xorg-xproto 7.0.31 h470a237_7 conda-forge
xz 5.2.4 h470a237_1 conda-forge
yaml 0.1.7 had09818_2
yarg 0.1.9 <pip>
zeromq 4.2.2 hbedb6e5_2
zict 0.1.3 py27h12c336c_0
zlib 1.2.11 ha838bed_2
$ conda config --show
add_anaconda_token: True
add_pip_as_python_dependency: True
aggressive_update_packages:
- ca-certificates
- certifi
- openssl
allow_non_channel_urls: False
allow_softlinks: False
always_copy: False
always_softlink: False
always_yes: None
anaconda_upload: None
auto_update_conda: True
changeps1: True
channel_alias: https://conda.anaconda.org
channel_priority: True
channels:
- conda-forge
- defaults
client_ssl_cert: None
client_ssl_cert_key: None
clobber: False
create_default_packages: []
custom_channels:
pkgs/r: https://repo.anaconda.com
home/memo/anaconda2/conda-bld: file://
pkgs/main: https://repo.anaconda.com
pkgs/pro: https://repo.anaconda.com
pkgs/free: https://repo.anaconda.com
custom_multichannels:
local: ["file:///home/memo/anaconda2/conda-bld"]
defaults: ["https://repo.anaconda.com/pkgs/main", "https://repo.anaconda.com/pkgs/free", "https://repo.anaconda.com/pkgs/r", "https://repo.anaconda.com/pkgs/pro"]
default_channels:
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/free
- https://repo.anaconda.com/pkgs/r
- https://repo.anaconda.com/pkgs/pro
disallowed_packages: []
download_only: False
envs_dirs:
- /home/memo/anaconda2/envs
- /home/memo/.conda/envs
force: False
json: False
local_repodata_ttl: 1
max_shlvl: 2
migrated_channel_aliases: []
no_dependencies: False
non_admin_enabled: True
notify_outdated_conda: True
offline: False
override_channels_enabled: True
path_conflict: clobber
pinned_packages: []
pkgs_dirs:
- /home/memo/anaconda2/pkgs
- /home/memo/.conda/pkgs
proxy_servers: {}
quiet: False
remote_connect_timeout_secs: 9.15
remote_max_retries: 3
remote_read_timeout_secs: 60.0
report_errors: None
rollback_enabled: True
safety_checks: warn
shortcuts: True
show_channel_urls: None
ssl_verify: True
track_features: []
use_index_cache: False
use_pip: True
verbosity: 0
whitelist_channels: []
Upvotes: 2
Views: 1035
Answers (2)
merv
Reputation: 76740
While removing Conda Forge from the global config will get around the particular issue, it could impact future solves on existing envs that had previously installed from Conda Forge. Instead, one can enforce the anaconda channel just for this particular env creation:
conda create -n py36 -c anaconda --override-channels python=3.6 anaconda
Upvotes: 1
darthbith
Reputation: 19597
It seems that the problem is that conda-forge appears first in the channel list. You can remove this channel with
conda config --remove channels conda-forge
Upvotes: 3
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