CODEWITHSUNDEEP
bashterminalanacondacommand-line-interfaceconda
rodalbert
rodalbert

Reputation: 11

Can't run Anaconda in MacOS terminal

I installed Anaconda on MacOS. I tried to run the conda command in terminal, but I got the following error message:

****/Users/rodalbert/.anaconda/navigator/a.tool ; exit;
/Users/rodalbert/.bash_profile:export:3: not an identifier: 2018.12
➜  ~ /Users/rodalbert/.anaconda/navigator/a.tool ; exit;
/Users/rodalbert/.anaconda/navigator/a.tool: line 1: syntax error near unexpected token `('
/Users/rodalbert/.anaconda/navigator/a.tool: line 1: `bash --init-file <(echo "source activate /Users/rodalbert/anaconda3;")'
[Process completed]****

I can't find the problem. Does someone know what to do in this case?

Content of .bash_profile

[[ -s "$HOME/.rvm/scripts/rvm" ]] && source "$HOME/.rvm/scripts/rvm" # Load RVM into a shell session *as a function*
export PATH=/Applications/Postgres.app/Contents/Versions/11/bin/psql:$PATH# added by Anaconda3 2018.12 installer
# >>> conda init >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$(CONDA_REPORT_ERRORS=false '/anaconda3/bin/conda' shell.bash hook 2> /dev/null)"
if [ $? -eq 0 ]; then
    \eval "$__conda_setup"
else
    if [ -f "/anaconda3/etc/profile.d/conda.sh" ]; then
        . "/anaconda3/etc/profile.d/conda.sh"
        CONDA_CHANGEPS1=false conda activate base
    else
        \export PATH="/anaconda3/bin:$PATH"
    fi
fi
unset __conda_setup
# <<< conda init <<<
# added by Anaconda3 2018.12 installer
# >>> conda init >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$(CONDA_REPORT_ERRORS=false '/Users/rodalbert/anaconda3/bin/conda' shell.bash hook 2> /dev/null)"
if [ $? -eq 0 ]; then
    \eval "$__conda_setup"
else
    if [ -f "/Users/rodalbert/anaconda3/etc/profile.d/conda.sh" ]; then
        . "/Users/rodalbert/anaconda3/etc/profile.d/conda.sh"
        CONDA_CHANGEPS1=false conda activate base
    else
        \export PATH="/Users/rodalbert/anaconda3/bin:$PATH"
    fi
fi
unset __conda_setup
# <<< conda init <<<

Upvotes: 1

Views: 3545

Answers (2)

Hieu Tran AGI
Hieu Tran AGI

Reputation: 899

I used MohammadChavos's solution, then conda can run on the terminal.

cd /path/to/anaconda/bin
./conda init zsh
or:
zsh conda init zsh

My case: cd opt/anaconda3/bin, then run: ./conda init zsh

Upvotes: 0

gyunter
gyunter

Reputation: 463

It seems like you're using Zsh.

Before executing any command from within Anaconda Navigator, try opening your Terminal app and switching shell to bash: chsh -s /bin/bash then restart terminal.

After you're done with Anaconda, switch back to Zsh: chsh -s /bin/zsh then restart terminal.

Upvotes: 4

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