CODEWITHSUNDEEP
pythondocker
Baktaawar
Baktaawar

Reputation: 7490

Docker image fail due to gcc (cytoolz)

I have a python flask application which I want to deploy on ubuntu server with docker.

So I transferred my whole application folder to ubuntu directory.

Then with root user, I am trying to create a dockerfile in the application folder as below: 

# Docker file for Support

# Pulling from base Python image

FROM python:3.7

# author of file
LABEL maintainer="Baktaawar"

# Set the working directory of the docker image
WORKDIR /support
COPY . /support


# packages that we need

RUN apt-get update \
    && apt-get install build-essential
RUN pip --no-cache-dir install -r requirements.txt


EXPOSE 8888

CMD ["python", "index.py"]

The requirements.txt file is the conda env packages list exported via 

pip freeze> requirments.txt

These are the packages in that. 

thinc==6.10.2
cytoolz==0.8.2
msgpack-numpy==0.4.1
msgpack-python==0.5.6
pathlib==1.0.1
termcolor==1.1.0
ujson==1.35
spacy==2.0.11
dash==0.26.2
dash-core-components==0.30.0rc1
dash-dangerously-set-inner-html==0.0.1
dash-html-components==0.11.0
dash-renderer==0.13.1
Flask==0.12.2
Flask-Compress==1.4.0
HTMLParser==0.0.2
matplotlib==2.1.2
matplotlib-venn==0.11.5
numpy==1.15.2
pandas==0.20.3
plotly==3.1.1
wordcloud==1.5.0

But when I run this via 

docker build -t support .

It starts installing but at the very end it throws an error for cytoolz and gcc error.

I got the gcc installed via build-essential as shown in my dockerfile. Also using 3.7 instead of python3.6-slim to avoid other gcc issues. 

      tstate->exc_type = local_type;
               ^~
    cytoolz/dicttoolz.c:9126:11: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_value’; did you mean ‘curexc_value’?
         tstate->exc_value = local_value;
               ^~
    cytoolz/dicttoolz.c:9127:11: error: ‘PyThreadState {aka struct _ts}’ has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’?
         tstate->exc_traceback = local_tb;
               ^~
    error: command 'gcc' failed with exit status 1

    ----------------------------------------
Command "/usr/local/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-install-oprwuva4/cytoolz/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-record-s_ua1t8c/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-oprwuva4/cytoolz/
The command '/bin/sh -c pip --no-cache-dir install -r requirements.txt' returned a non-zero code: 1

Upvotes: 0

Views: 1041

Answers (1)

Walter Schweitzer
Walter Schweitzer

Reputation: 424

Run the following:

gcc --version

If it's not installed add the following package:

sudo apt-get install python3.6-dev

Upvotes: 1

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