Reputation: 663
I'm using tidygraph and ggraph to plot a network. Is there a way to selectively manipulate nodes? Specifically, size and color, separately.
# example data
rstat_nodes <- data.frame(name = c("Hadley", "David", "Romain", "Julia"))
rstat_edges <- data.frame(from = c(1, 1, 1, 2, 3, 3, 4, 4, 4),
to = c(2, 3, 4, 1, 1, 2, 1, 2, 3))
gr <- tbl_graph(nodes = rstat_nodes, edges = rstat_edges)
as_tbl_graph(gr) %>%
mutate(centrality = centrality_degree(normalized = T)) %>%
ggraph(layout = 'auto') +
#geom_edge_link() +
geom_edge_arc(curvature=0.2,alpha=0.5) +
geom_node_point(aes(size = 0.2, colour = centrality)) +
scale_color_viridis(guide = 'legend') +
ggtitle("Network Degree Centrality (Normalized)") +
theme_graph()
Upvotes: 3
Views: 1573
Reputation: 1944
Yes, you can use activate
from the tidygraph
package to access the nodes
and edges
dataframes. You can then use dplyr
to manipulate the data in each file. You can also pipe directly into a ggraph
.
library(tidyverse)
library(igraph)
library(ggraph)
library(tidygraph)
library(graphlayouts)
library(scales)
# example data
rstat_nodes <-
data.frame(name = c("Hadley", "David", "Romain", "Julia"))
rstat_edges <- data.frame(from = c(1, 1, 1, 2, 3, 3, 4, 4, 4),
to = c(2, 3, 4, 1, 1, 2, 1, 2, 3))
gr <- tbl_graph(nodes = rstat_nodes, edges = rstat_edges)
gr %>%
activate(nodes) %>% # use dplyr on nodes
mutate(David =
case_when(name == 'David' ~ 2, T ~ 0),
David = as.character(David)) %>%
activate(edges) %>% # same on edge list
mutate(David = case_when(from == 2 ~ 1, T ~ 0),
David = as.character(David)) %>%
ggraph(., layout = 'auto')+
geom_edge_link(aes(color = David),
width = 1)+
geom_node_point(aes(color = David),
size = 5)+
geom_node_text(aes(label = name),
nudge_x = .05,
nudge_y = .05)
Upvotes: 3