Reputation: 2260
I am trying to convert some code to run with Numba. np.einsum
is not supported therefore I am trying to replace it with Numba supported functions.
I understood in part how np.einsum
works and for example I get that:
x, y, z = 3, 2, 4
A = np.arange(x * y * z).reshape(x, y, z)
B = np.arange(x * y).reshape(x, y)
C = np.einsum('ijk,kj->ki', A.T, B)
is equivalent to:
C = np.sum(A.T * B.T, axis=1).T
e.g. I take ijk
and the 3D canonical indices, but now I have the following expression which I cannot understand:
C = np.einsum('aij,jka->ajk', A, B)
What is the meaning of the index 'a'
?
What would be an equivalent transformation using multiplication, sum and transposing?
Upvotes: 0
Views: 63
Reputation: 53089
Which letters you use in the axes string doesn't matter much (but see bottom of this post), for example we can put z
for a
:
>>> A = np.arange(3*4*5).reshape(3,4,5)
>>> B = np.arange(5*2*3).reshape(5,2,3)
>>>
>>> np.einsum('aij,jka->ajk',A,B)
array([[[ 0, 90],
[ 204, 306],
[ 456, 570],
[ 756, 882],
[1104, 1242]],
[[ 110, 440],
[ 798, 1140],
[1534, 1888],
[2318, 2684],
[3150, 3528]],
[[ 380, 950],
[1552, 2134],
[2772, 3366],
[4040, 4646],
[5356, 5974]]])
>>> np.einsum('zij,jkz->zjk',A,B)
array([[[ 0, 90],
[ 204, 306],
[ 456, 570],
[ 756, 882],
[1104, 1242]],
[[ 110, 440],
[ 798, 1140],
[1534, 1888],
[2318, 2684],
[3150, 3528]],
[[ 380, 950],
[1552, 2134],
[2772, 3366],
[4040, 4646],
[5356, 5974]]])
Equivalent without einsum
:
>>> A.sum(1)[..., None]*B.transpose(2,0,1)
array([[[ 0, 90],
[ 204, 306],
[ 456, 570],
[ 756, 882],
[1104, 1242]],
[[ 110, 440],
[ 798, 1140],
[1534, 1888],
[2318, 2684],
[3150, 3528]],
[[ 380, 950],
[1552, 2134],
[2772, 3366],
[4040, 4646],
[5356, 5974]]])
The identity of index letters matters where the output axes are implicit, because they are then assumed to be in alphabetical order
>>> A = np.ones((2,1))
>>> np.einsum('ab', A)
array([[1.],
[1.]])
>>> np.einsum('zb', A)
array([[1., 1.]])
Upvotes: 3