Reputation: 7733
I have a dataframe like as given below
df1 = pd.DataFrame({'subject_id' :[1,1,1,1,1,1,1,2,2,2,2],'day':[3,7,9,10,11,19,20,7,13,18,22] , 'fake_flag' :['fake VAC','','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC']})
It looks like as shown below
I would like to fill values in actual_flag
column based on below rules
a) fake_flag
should have a value as fake_vac
and it shouldn't be empty
b) fill values only for 1st day when fake_vac
appears and for records after 14 days interval
.
This is what I tried
t = df1[df1['fake_flag'] == 'fake VAC']
sub_list = t['subject_id'].unique().tolist()
for sub in sub_list:
day_list = t['day'][t['subject_id']==sub].tolist()
min_value = min(day_list)
index = t[t['day']==min_value].index
df1.loc[index, 'actual_flag'] = 'act_vac'
i_14day = min_value + 14
day_values = [i for i in day_list if i >= i_14day]
print("day greater than 14 are ", day_values)
if len(day_values) > 0:
for val in day_values:
index = t[t['day']==val].index
df1.loc[index, 'actual_flag'] = 'act_vac'
As you can see this is very lengthy and I can't do this for dataset of million records. Any efficient and elegant approach is helpful
I expect my output to be like as shown below
In this case for subject_id = 1, day 3
is the 1st time when fake vac
appears and day 19
(19 is gt > 14 days interval from 3) and day 20
(20 is gt > 14 days interval from 3) are after 14 days interval. Any elegant and efficient solution is helpful
sample data for testing
df1 = pd.DataFrame({'subject_id' :[1,1,1,1,1,1,1,1,2,2,2,2],'day':[2,3,7,9,10,11,19,20,7,13,18,22] , 'fake_flag' :['','fake VAC','','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC','fake VAC']})
** updated screenshot**
Upvotes: 1
Views: 96
Reputation: 88276
One way would be to subtract the first day from all dates within each group, check which are greater than 14
and set these to "act_vac"
, as well as the initial days:
import numpy as np
# Returns a boolean with True if a given day - first day > 14
ix = df1.fake_flag.ne('').groupby(df1.subject_id).transform('idxmax')
c1 = df1.day.sub(df1.values[ix, 1]).gt(14)
# True if the id is different to previous row
c2 = df1.subject_id.ne(df1.subject_id.shift())
# logical OR of the above conditions
df1['actual_flag'] = np.where(c1 | c2, 'act_vac', '')
subject_id day fake_flag actual_flag
0 1 3 fake VAC act_vac
1 1 7
2 1 9 fake VAC
3 1 10 fake VAC
4 1 11 fake VAC
5 1 19 fake VAC act_vac
6 1 20 fake VAC act_vac
7 2 7 fake VAC act_vac
8 2 13 fake VAC
9 2 18 fake VAC
10 2 22 fake VAC act_vac
Details
df1.assign(c1=c1, c2=c2, actual_flag= np.where(c1 | c2, 'act_vac', ''))
subject_id day fake_flag actual_flag c1 c2
0 1 3 fake VAC act_vac False True
1 1 7 False False
2 1 9 fake VAC False False
3 1 10 fake VAC False False
4 1 11 fake VAC False False
5 1 19 fake VAC act_vac True False
6 1 20 fake VAC act_vac True False
7 2 7 fake VAC act_vac False True
8 2 13 fake VAC False False
9 2 18 fake VAC False False
10 2 22 fake VAC act_vac True False
Upvotes: 1