CODEWITHSUNDEEP
pandaspysparkpyarrow
R. Lamari
R. Lamari

Reputation: 331

how to enable Apache Arrow in Pyspark

I am trying to enable Apache Arrow for conversion to Pandas. I am using:

pyspark 2.4.4 pyarrow 0.15.0 pandas 0.25.1 numpy 1.17.2

This is the example code

spark.conf.set("spark.sql.execution.arrow.enabled", "true")
x = pd.Series([1, 2, 3])
df = spark.createDataFrame(pd.DataFrame(x, columns=["x"]))

I got this warning message

c:\users\administrator\appdata\local\programs\python\python37\lib\site-packages\pyspark\sql\session.py:714: UserWarning: createDataFrame attempted Arrow optimization because 'spark.sql.execution.arrow.enabled' is set to true; however, failed by the reason below:
  An error occurred while calling z:org.apache.spark.sql.api.python.PythonSQLUtils.readArrowStreamFromFile.
: java.lang.IllegalArgumentException
    at java.nio.ByteBuffer.allocate(ByteBuffer.java:334)
    at org.apache.arrow.vector.ipc.message.MessageSerializer.readMessage(MessageSerializer.java:543)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$$anon$3.readNextBatch(ArrowConverters.scala:243)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$$anon$3.<init>(ArrowConverters.scala:229)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$.getBatchesFromStream(ArrowConverters.scala:228)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$$anonfun$readArrowStreamFromFile$2.apply(ArrowConverters.scala:216)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$$anonfun$readArrowStreamFromFile$2.apply(ArrowConverters.scala:214)
    at org.apache.spark.util.Utils$.tryWithResource(Utils.scala:2543)
    at org.apache.spark.sql.execution.arrow.ArrowConverters$.readArrowStreamFromFile(ArrowConverters.scala:214)
    at org.apache.spark.sql.api.python.PythonSQLUtils$.readArrowStreamFromFile(PythonSQLUtils.scala:46)
    at org.apache.spark.sql.api.python.PythonSQLUtils.readArrowStreamFromFile(PythonSQLUtils.scala)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
    at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
    at py4j.Gateway.invoke(Gateway.java:282)
    at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
    at py4j.commands.CallCommand.execute(CallCommand.java:79)
    at py4j.GatewayConnection.run(GatewayConnection.java:238)
    at java.lang.Thread.run(Thread.java:748)

Attempting non-optimization as 'spark.sql.execution.arrow.fallback.enabled' is set to true.
  warnings.warn(msg)

Upvotes: 22

Views: 23593

Answers (2)

K.S.
K.S.

Reputation: 3189

For calling my pandas UDF in my Spark 2.4.4 cluster with pyarrow==0.15. I struggled with setting the ARROW_PRE_0_15_IPC_FORMAT=1 flag as mentioned above successfully.

I set the flag in (1) the command line via export on the head node, (2) via spark-env.sh and yarn-env.sh on all nodes in the cluster, and (3) in the pyspark code itself from my script on the head node. None of these worked to actually set this flag inside of the udf, for unknown reasons.

The simplest solution I found was to call this inside the udf:

    @pandas_udf("integer", PandasUDFType.SCALAR)
    def foo(*args):
        import os
        os.environ["ARROW_PRE_0_15_IPC_FORMAT"] = "1"
        #...

Hopefully this saves someone else several hours.

Upvotes: 13

Wes McKinney
Wes McKinney

Reputation: 105521

We made a change in 0.15.0 that makes the default behavior of pyarrow incompatible with older versions of Arrow in Java -- your Spark environment seems to be using an older version.

Your options are

  • Set the environment variable ARROW_PRE_0_15_IPC_FORMAT=1 from where you are using Python
  • Downgrade to pyarrow < 0.15.0 for now.

Upvotes: 52

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