CODEWITHSUNDEEP
pythonazuredatabricksazure-databricks
Umar.H
Umar.H

Reputation: 23099

mount error when trying to access the Azure DBFS file system in Azure Databricks

I'm able to establish a connection to my Databricks FileStore DBFS and access the filestore.

Reading, writing, and transforming data with Pyspark is possible but when I try to use a local Python API such as pathlib or the OS module I am unable to get past the first level of the DBFS file system

I can use a magic command:

%fs ls dbfs:\mnt\my_fs\... which works perfectly and lists all the child directories?

but if I do os.listdir('\dbfs\mnt\my_fs\') it returns ['mount.err'] as a return value

I've tested this on a new cluster and the result is the same

I'm using Python on a Databricks Runtine Version 6.1 with Apache Spark 2.4.4

is anyone able to advise.

Edit :

Connection Script :

I've used the Databricks CLI library to store my credentials which are formatted according to the databricks documentation:

 def initialise_connection(secrets_func):
  configs = secrets_func()
  # Check if the mount exists
  bMountExists = False
  for item in dbutils.fs.ls("/mnt/"):
      if str(item.name) == r"WFM/":
          bMountExists = True
      # drop if exists to refresh credentials
      if bMountExists:
        dbutils.fs.unmount("/mnt/WFM")
        bMountExists = False

      # Mount a drive
      if not (bMountExists):
          dbutils.fs.mount(
              source="adl://test.azuredatalakestore.net/WFM",
              mount_point="/mnt/WFM",
              extra_configs=configs
          )
          print("Drive mounted")
      else:
          print("Drive already mounted")

Upvotes: 9

Views: 19265

Answers (3)

danialk
danialk

Reputation: 1453

We experienced this issue when the same container was mounted to two different paths in the workspace. Unmounting all and remounting resolved our issue. We were using Databricks version 6.2 (Spark 2.4.4, Scala 2.11). Our blob store container config:

  • Performance/Access tier: Standard/Hot
  • Replication: Read-access geo-redundant storage (RA-GRS)
  • Account kind: StorageV2 (general purpose v2)

Notebook script to run to unmount all mounts in /mnt:

# Iterate through all mounts and unmount 
print('Unmounting all mounts beginning with /mnt/')
dbutils.fs.mounts()
for mount in dbutils.fs.mounts():
  if mount.mountPoint.startswith('/mnt/'):
    dbutils.fs.unmount(mount.mountPoint)

# Re-list all mount points
print('Re-listing all mounts')
dbutils.fs.mounts()

Minimal job to test on automated job cluster

Assuming you have a separate process to create the mounts. Create job definition (job.json) to run Python script on automated cluster:

{
  "name": "Minimal Job",
  "new_cluster": {
    "spark_version": "6.2.x-scala2.11",
    "spark_conf": {},
    "node_type_id": "Standard_F8s",
    "driver_node_type_id": "Standard_F8s",
    "num_workers": 2,
    "enable_elastic_disk": true,
    "spark_env_vars": {
      "PYSPARK_PYTHON": "/databricks/python3/bin/python3"
    }
  },
  "timeout_seconds": 14400,
  "max_retries": 0,
  "spark_python_task": {
    "python_file": "dbfs:/minimal/job.py"
  }
}

Python file (job.py) to print out mounts:

import os

path_mounts = '/dbfs/mnt/'
print(f"Listing contents of {path_mounts}:")
print(os.listdir(path_mounts))

path_mount = path_mounts + 'YOURCONTAINERNAME'
print(f"Listing contents of {path_mount }:")
print(os.listdir(path_mount))

Run databricks CLI commands to run job. View Spark Driver logs for output, confirming that mount.err does not exist.

databricks fs mkdirs dbfs:/minimal
databricks fs cp job.py dbfs:/minimal/job.py --overwrite
databricks jobs create --json-file job.json
databricks jobs run-now --job-id <JOBID FROM LAST COMMAND>

Upvotes: 5

bramb
bramb

Reputation: 253

We have experienced the same issue when connecting to the an Azure Generation2 storage account (without hierarchical name spaces).

The error seems to occur when switching the Databricks Runtime Environment from 5.5 to 6.x. However, we have not been able to pinpoint the exact reason for this. We assume some functionality might have been deprecated.

Upvotes: 1

CHEEKATLAPRADEEP
CHEEKATLAPRADEEP

Reputation: 12768

Updating Answer: With Azure Data Lake Gen1 storage accounts: dbutils has access adls gen1 tokens/access creds and hence the file listing within mnt point works where as std py api calls do not have access to creds/spark conf, first call that you see is listing folders and its not making any calls to adls api's.

I have tested in Databricks Runtime version 6.1 (includes Apache Spark 2.4.4, Scala 2.11)

Commands works as excepted without any error message.

enter image description here

Update: Output for the inside folders.

enter image description here

Hope this helps. Could you please try and do let us know.

Upvotes: -1

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