Reputation: 186
So I'm trying to go through my dataframe in pandas and if the value of two columns is equal to something, then I change a value in that location, here is a simplified version of the loop I've been using (I changed the values of the if/else function because the original used regex and stuff and was quite complicated):
pro_cr = ["IgA", "IgG", "IgE"] # CR's considered productive
rows_changed = 0
prod_to_unk = 0
unk_to_prod = 0
changed_ids = []
for index in df_sample.index:
if num=1 and color="red":
pass
elif num=2 and color="blue":
prod_to_unk += 1
changed_ids.append(df_sample.loc[index, "Sequence ID"])
df_sample.at[index, "Functionality"] = "unknown"
rows_changed += 1
elif num=3 and color="green":
unk_to_prod += 1
changed_ids.append(df_sample.loc[index, "Sequence ID"])
df_sample.at[index, "Functionality"] = "productive"
rows_changed += 1
else:
pass
print("Number of productive columns changed to unknown: {}".format(prod_to_unk))
print("Number of unknown columns changed to productive: {}".format(unk_to_prod))
print("Total number of rows changed: {}".format(rows_changed))
So the main problem is the changing code:
df_sample.at[index, "Functionality"] = "unknown" # or productive
If I run this code without these lines of code, it works properly, it finds all the correct locations, tells me how many were changed and what their ID's are, which I can use to validate with the CSV file.
If I use df_sample["Functionality"][index] = "unknown" # or productive
the code runs, but checking the rows that have been changed shows that they were not changed at all.
When I use df.at[row, column] = value
I get "AttributeError: 'BlockManager' object has no attribute 'T'"
I have no idea why this is showing up. There are no duplicate columns. Hope this was clear (if not let me know and I'll try to clarify it). Thanks!
Upvotes: 2
Views: 194
Reputation: 9701
To be honest, I've never used df.at
- but try using df.loc
instead:
df_sample.loc[index, "Functionality"] = "unknown"
Upvotes: 2