Reputation: 2253
I recently received great help from SO in producing this customized facet_wrap
-plot shown below.
Question: how can I add the dotted linetype used in geom_quantile(linetype=2)
as legend with the text "50th percentile"?
I have sought solutions in similar questions on SO, but my question has not been answered.
My current plot looks like this
Produced with the following code
cols = c("#E1B930", "#2C77BF","#E38072","#6DBCC3")
ggplot(p, aes(x=n.fjernet,y=os.neck)) + geom_point(aes(color=uiccc),shape=20, size=5,alpha=0.7) +
geom_quantile(quantiles = 0.5,col="black", size=1,linetype=2, show.legend = F) + facet_wrap(.~factor(uiccc)) +
scale_fill_manual(values=cols) +
scale_colour_manual(values=cols) +
scale_x_continuous(breaks = seq(0,50, by=10), name="Lymph nodal yield") +
scale_y_continuous(name="Time to death (months)") +
theme(strip.background = element_blank(),
strip.text = element_text(color = "transparent"),
axis.title.x = element_text(color = "grey20", size = 14, face="bold", margin=ggplot2::margin(t=10)),
axis.title.y = element_text(color = "grey20", size = 14, face="bold", margin=ggplot2::margin(r=10)),
legend.position="none",
plot.margin = unit(c(1,3,1,1), "lines")) +
coord_cartesian(clip = "off",ylim = c(0,175)) +
geom_text(data = . %>% distinct(uiccc),
aes(label = factor(uiccc), color = uiccc), y = 190, x = 30, hjust = 0.5, fontface = "bold",cex=5)
I would like the plot to have a legend that indicates the "50th percentile" as demonstrated by the linetype=2
in geom_quantile()
, exclusively, which looks like this (manually added in photoshop):
First: I have removed theme(legend.position="none")
Second: I have added show.legend=TRUE
in geom_quantile
Third: I have added show.legend=FALSE
in geom_point
Unfortunately, these edits does not produce the requested legend:
How can I proceed?
My data p
p <- structure(list(n.fjernet = c(18L, 11L, 14L, 15L, 9L, 6L, 3L,
16L, 4L, 6L, 10L, 13L, 33L, 16L, 6L, 9L, 23L, 9L, 8L, 13L, 5L,
30L, 25L, 3L, 9L, 9L, 12L, 7L, 38L, 5L, 7L, 15L, 4L, 6L, 15L,
9L, 8L, 7L, 4L, 6L, 10L, 8L, 4L, 9L, 10L, 14L, 14L, 3L, 4L, 6L,
6L, 20L, 3L, 26L, 13L, 13L, 13L, 13L, 3L, 7L, 6L, 5L, 10L, 15L,
29L, 7L, 6L, 11L, 17L, 14L, 18L, 22L, 9L, 20L, 34L, 9L, 8L, 8L,
11L, 3L, 4L, 4L, 5L, 3L, 2L, 8L, 5L, 18L, 7L, 9L, 13L, 18L, 19L,
14L, 46L, 23L, 11L, 6L, 18L, 20L, 4L, 2L, 7L, 7L, 4L, 11L, 13L,
13L, 9L, 9L, 9L, 12L, 11L, 16L, 6L, 13L, 8L, 17L, 5L, 8L, 22L,
19L, 3L, 15L, 14L, 7L, 18L, 9L, 10L, 18L, 24L, 11L, 15L, 7L,
6L, 4L, 24L, 23L, 8L, 20L, 9L, 22L, 11L, 2L, 24L, 15L, 5L, 8L,
11L, 11L, 11L, 15L, 6L, 16L, 7L, 9L, 16L, 11L, 33L, 27L, 16L,
57L, 5L, 7L, 8L, 11L, 15L, 15L, 12L, 5L, 9L, 49L, 11L, 28L, 19L,
13L, 23L, 11L, 12L, 10L, 4L, 14L, 6L, 12L, 32L, 13L, 12L, 4L,
11L, 17L, 10L, 5L, 15L, 21L, 19L, 11L, 31L, 9L, 20L, 11L, 16L,
12L, 6L, 16L, 27L, 30L, 18L, 18L, 10L, 7L, 23L, 16L, 15L, 4L,
12L, 9L, 10L, 11L, 7L, 8L, 8L, 7L, 6L, 9L, 9L, 13L, 15L, 12L,
35L, 12L, 5L, 19L, 27L, 34L, 10L, 16L, 18L, 6L, 22L), os.neck = c(11.5,
74.38, 17.02, 7.89, 96.03, 40.48, 17.74, 14.65, 62.46, 12.55,
9.92, 26.05, 45.47, 17.38, 39.72, 51.45, 8.61, 76.98, 67.09,
94.79, 72.15, 93.93, 17.05, 12.48, 91.6, 15.87, 11.04, 67.22,
67.02, 8.94, 6.6, 5.09, 10.68, 17.15, 0.07, 5.19, 40.77, 0.2,
170.88, 5.55, 1.61, 38.28, 10.58, 32.99, 110.98, 103.69, 122.32,
14.78, 42.74, 4.04, 8.28, 84.96, 11.7, 49.97, 120.48, 52.6, 71.26,
16.3, 100.14, 55.03, 6.51, 89.89, 51.71, 24.97, 55.66, 21.91,
81.48, 30.92, 1.58, 7.52, 30.75, 3.45, 19.22, 5.42, 17.68, 45.54,
76.22, 125.34, 83.62, 30.82, 90.32, 1.84, 19.98, 20.53, 32.59,
54.77, 2.3, 106.84, 22.28, 45.18, 4.47, 39.66, 32.3, 16.23, 3.88,
2.23, 0.23, 18.73, 0.79, 28.75, 79.54, 14.46, 15.15, 54.97, 48.59,
34.83, 58.42, 35.29, 45.73, 57.53, 63.11, 65.05, 29.54, 77.21,
63.48, 83.35, 34.3, 64.49, 29.54, 62.69, 21.62, 49.35, 99.02,
15.8, 41.89, 12.98, 13.8, 43.6, 57.23, 31.38, 70.74, 39.46, 20.76,
67.22, 127.15, 74.12, 1.97, 7.39, 25.17, 28.22, 14, 36.53, 20.83,
19.55, 40.77, 27.76, 45.31, 34.46, 35.55, 26.94, 9.43, 10.51,
6.8, 8.18, 8.02, 14.29, 6.11, 13.8, 4.9, 4.04, 14.82, 11.66,
73.07, 92.91, 99.98, 10.64, 10.05, 95.8, 7.23, 12.81, 43.99,
13.9, 10.25, 16.36, 18.2, 18.76, 12.32, 8.64, 11.79, 112.04,
70.97, 31.28, 28.85, 21.49, 19.94, 22.14, 29.44, 67.62, 11.01,
45.24, 110.72, 20.24, 14.06, 12.88, 31.51, 8.08, 13.08, 21.45,
24.28, 21.98, 32.89, 23.26, 15.41, 15.41, 13.8, 40.12, 8.02,
15.77, 49.81, 18.17, 24.21, 47.08, 6.6, 37.16, 13.01, 8.38, 14.36,
18.27, 17.28, 73.76, 68.21, 22.83, 2.66, 69.06, 17.05, 8.61,
23.33, 13.34, 12.65, 8.77, 128.92, 16.1, 4.99, 11.73, 22.97,
40.12, 20.37, 2.04, 45.73), uiccc = structure(c(4L, 3L, 3L, 2L,
2L, 2L, 2L, 4L, 1L, 1L, 2L, 1L, 4L, 2L, 1L, 2L, 3L, 1L, 2L, 3L,
2L, 1L, 2L, 3L, 2L, 4L, 1L, 1L, 2L, 4L, 4L, 1L, 3L, 3L, 4L, 3L,
1L, 4L, 2L, 3L, 4L, 4L, 4L, 3L, 2L, 4L, 1L, 4L, 2L, 4L, 4L, 2L,
4L, 4L, 1L, 4L, 2L, 3L, 2L, 2L, 3L, 2L, 4L, 4L, 2L, 2L, 3L, 1L,
4L, 4L, 4L, 4L, 4L, 3L, 2L, 2L, 2L, 2L, 2L, 1L, 1L, 2L, 1L, 1L,
1L, 1L, 4L, 2L, 4L, 1L, 2L, 1L, 1L, 3L, 3L, 4L, 4L, 4L, 4L, 4L,
4L, 2L, 3L, 3L, 4L, 1L, 1L, 3L, 1L, 4L, 2L, 1L, 3L, 1L, 2L, 1L,
1L, 4L, 1L, 1L, 4L, 1L, 1L, 3L, 2L, 2L, 1L, 4L, 4L, 4L, 4L, 1L,
1L, 1L, 2L, 2L, 4L, 4L, 2L, 3L, 4L, 2L, 4L, 1L, 1L, 3L, 3L, 1L,
1L, 3L, 4L, 4L, 2L, 4L, 4L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 3L, 2L,
2L, 4L, 3L, 1L, 4L, 3L, 4L, 4L, 3L, 1L, 4L, 4L, 4L, 4L, 2L, 2L,
4L, 4L, 1L, 4L, 4L, 2L, 4L, 4L, 4L, 3L, 4L, 3L, 3L, 4L, 4L, 2L,
4L, 4L, 2L, 4L, 4L, 4L, 4L, 1L, 4L, 4L, 3L, 4L, 4L, 4L, 4L, 4L,
4L, 4L, 4L, 4L, 4L, 2L, 3L, 1L, 2L, 1L, 2L, 2L, 4L, 4L, 4L, 4L,
4L, 4L, 1L, 3L, 4L, 4L, 1L, 3L, 3L, 4L, 3L), .Label = c("UICC Stage I",
"UICC Stage II", "UICC Stage III", "UICC Stage IV"), class = "factor")), row.names = c(NA,
-239L), class = "data.frame")
Upvotes: 3
Views: 524
Reputation: 16178
One possible solution is to specify a "fake" color
title in the aes
of geom_quantile
.
Then, you can remove legend for points and labels by adding show.legend = FALSE
into their respective geom
and manipulate breaks
in scale_color_manual
to show only the color attribute for your 50th percentile
category. Finally, manipulating various parameters for legend
in theme
will get you to what you desired.
Altogether, you can have a code like this (PS: scale_fill_manual
is useless in your current example):
ggplot(p, aes(x=n.fjernet,y=os.neck)) +
geom_point(aes(color=uiccc),shape=20, size=5,alpha=0.7, show.legend = FALSE) +
geom_quantile(aes(colour = "50th percentile"), quantiles = 0.5, size=1,linetype=2) +
facet_wrap(.~factor(uiccc)) +
#scale_fill_manual(values=cols) +
scale_colour_manual(values=cols, breaks = c("50th percentile"), name = "") +
scale_x_continuous(breaks = seq(0,50, by=10), name="Lymph nodal yield") +
scale_y_continuous(name="Time to death (months)") +
theme(strip.background = element_blank(),
strip.text = element_text(color = "transparent"),
axis.title.x = element_text(color = "grey20", size = 14, face="bold", margin=ggplot2::margin(t=10)),
axis.title.y = element_text(color = "grey20", size = 14, face="bold", margin=ggplot2::margin(r=10)),
legend.position="top",
legend.text=element_text(size=rel(2)),
legend.key.size = unit(2, "cm"),
plot.margin = unit(c(1,3,1,1), "lines")) +
coord_cartesian(clip = "off",ylim = c(0,175)) +
geom_text(data = . %>% distinct(uiccc),
aes(label = factor(uiccc), color = uiccc), y = 190, x = 30, hjust = 0.5, fontface = "bold",cex=5, show.legend = FALSE)
Upvotes: 3