Gustav Rasmussen
Reputation: 3961
Get UTC timestamp from PySpark string column
I have a PySpark dataframe with a single string column, from which I seek to compose an additional column containing the corresponding UTC timestamp (See 2 example rows, and column data type):
df.show(2, False)
df.dtypes
+-------------------------+
|local_timestamp |
+-------------------------+
|2020-11-16T08:42:10+01:00|
|2020-11-16T08:41:49+01:00|
+-------------------------+
only showing top 2 rows
[('local_timestamp', 'string')]
Python version I am using: Python 3.6.11
Libraries I am using:
import datetime
from datetime import datetime as dt
from datetime import timezone
from pyspark.sql.functions import *
from pyspark.sql.types import FloatType
from pyspark.sql import functions as F
A small example of the conversion I seek:
now = dt.now()
utc_time = now.replace(tzinfo = timezone.utc)
utc_time = utc_time.timestamp()
print(utc_timestamp)
Producing:
1606728360.423705
I have tried achieving this through the use of an UDF:
def get_utz(date_time_str="2020-11-16T08:42:10+01:00"):
"""Get UTZ timestamp from datetime-string"""
date_time_obj = dt.strptime(date_time_str, "%Y-%m-%dT%H:%M:%SZ")
utc_time = date_time_obj.replace(tzinfo = timezone.utc)
return utc_time.timestamp()
udf_get_utz = F.udf(get_utz, FloatType())
df = df.withColumn("utc_time",
udf_get_utz("local_timestamp")
)
df.show()
This however throws an error:
An error occurred while calling o1312.showString.
...
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
Any idea what this error means, and / or how I can arrive at my desired dataframe with UTC timestamp ?
Addition, as requested in the comments: Full traceback:
An error was encountered:
An error occurred while calling o1312.showString.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 99.0 failed 4 times, most recent failure: Lost task 0.3 in stage 99.0 (TID 296, ip-172-31-44-205.eu-central-1.compute.internal, executor 1): org.apache.spark.api.python.PythonException: Traceback (most recent call last):
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 377, in main
process()
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 372, in process
serializer.dump_stream(func(split_index, iterator), outfile)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 345, in dump_stream
self.serializer.dump_stream(self._batched(iterator), stream)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 141, in dump_stream
for obj in iterator:
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 334, in _batched
for item in iterator:
File "<string>", line 1, in <lambda>
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 85, in <lambda>
return lambda *a: f(*a)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/util.py", line 99, in wrapper
return f(*args, **kwargs)
File "<stdin>", line 4, in get_utz
File "/usr/lib64/python3.6/_strptime.py", line 565, in _strptime_datetime
tt, fraction = _strptime(data_string, format)
File "/usr/lib64/python3.6/_strptime.py", line 362, in _strptime
(data_string, format))
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:452)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:81)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:64)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:406)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$13$$anon$1.hasNext(WholeStageCodegenExec.scala:636)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:255)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:247)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1889)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1877)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1876)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1876)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:926)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2110)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2059)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2048)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:737)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:365)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:3383)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3364)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3363)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2544)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2758)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:254)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:291)
at sun.reflect.GeneratedMethodAccessor98.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.api.python.PythonException: Traceback (most recent call last):
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 377, in main
process()
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 372, in process
serializer.dump_stream(func(split_index, iterator), outfile)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 345, in dump_stream
self.serializer.dump_stream(self._batched(iterator), stream)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 141, in dump_stream
for obj in iterator:
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 334, in _batched
for item in iterator:
File "<string>", line 1, in <lambda>
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 85, in <lambda>
return lambda *a: f(*a)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/util.py", line 99, in wrapper
return f(*args, **kwargs)
File "<stdin>", line 4, in get_utz
File "/usr/lib64/python3.6/_strptime.py", line 565, in _strptime_datetime
tt, fraction = _strptime(data_string, format)
File "/usr/lib64/python3.6/_strptime.py", line 362, in _strptime
(data_string, format))
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:452)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:81)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:64)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:406)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$13$$anon$1.hasNext(WholeStageCodegenExec.scala:636)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:255)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:247)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Traceback (most recent call last):
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000001/pyspark.zip/pyspark/sql/dataframe.py", line 378, in show
print(self._jdf.showString(n, 20, vertical))
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000001/py4j-0.10.7-src.zip/py4j/java_gateway.py", line 1257, in __call__
answer, self.gateway_client, self.target_id, self.name)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000001/pyspark.zip/pyspark/sql/utils.py", line 63, in deco
return f(*a, **kw)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000001/py4j-0.10.7-src.zip/py4j/protocol.py", line 328, in get_return_value
format(target_id, ".", name), value)
py4j.protocol.Py4JJavaError: An error occurred while calling o1312.showString.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 99.0 failed 4 times, most recent failure: Lost task 0.3 in stage 99.0 (TID 296, ip-172-31-44-205.eu-central-1.compute.internal, executor 1): org.apache.spark.api.python.PythonException: Traceback (most recent call last):
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 377, in main
process()
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 372, in process
serializer.dump_stream(func(split_index, iterator), outfile)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 345, in dump_stream
self.serializer.dump_stream(self._batched(iterator), stream)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 141, in dump_stream
for obj in iterator:
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 334, in _batched
for item in iterator:
File "<string>", line 1, in <lambda>
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 85, in <lambda>
return lambda *a: f(*a)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/util.py", line 99, in wrapper
return f(*args, **kwargs)
File "<stdin>", line 4, in get_utz
File "/usr/lib64/python3.6/_strptime.py", line 565, in _strptime_datetime
tt, fraction = _strptime(data_string, format)
File "/usr/lib64/python3.6/_strptime.py", line 362, in _strptime
(data_string, format))
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:452)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:81)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:64)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:406)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$13$$anon$1.hasNext(WholeStageCodegenExec.scala:636)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:255)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:247)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1889)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1877)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1876)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1876)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:926)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:926)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2110)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2059)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2048)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:737)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:365)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:3383)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3364)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3363)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2544)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2758)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:254)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:291)
at sun.reflect.GeneratedMethodAccessor98.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.api.python.PythonException: Traceback (most recent call last):
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 377, in main
process()
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 372, in process
serializer.dump_stream(func(split_index, iterator), outfile)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 345, in dump_stream
self.serializer.dump_stream(self._batched(iterator), stream)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 141, in dump_stream
for obj in iterator:
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/serializers.py", line 334, in _batched
for item in iterator:
File "<string>", line 1, in <lambda>
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/worker.py", line 85, in <lambda>
return lambda *a: f(*a)
File "/mnt/yarn/usercache/livy/appcache/application_1606723718940_0001/container_1606723718940_0001_01_000002/pyspark.zip/pyspark/util.py", line 99, in wrapper
return f(*args, **kwargs)
File "<stdin>", line 4, in get_utz
File "/usr/lib64/python3.6/_strptime.py", line 565, in _strptime_datetime
tt, fraction = _strptime(data_string, format)
File "/usr/lib64/python3.6/_strptime.py", line 362, in _strptime
(data_string, format))
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.handlePythonException(PythonRunner.scala:452)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:81)
at org.apache.spark.sql.execution.python.PythonUDFRunner$$anon$1.read(PythonUDFRunner.scala:64)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:406)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$13$$anon$1.hasNext(WholeStageCodegenExec.scala:636)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:255)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:247)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Upvotes: 1
Views: 4649
Answers (2)
mck
Reputation: 42392
For Python<3.7 you can do this in Spark directly:
df.select(F.to_utc_timestamp(F.to_timestamp(F.col('local_timestamp'), "yyyy-MM-dd'T'HH:mm:ssXXX"), 'UTC'))
Upvotes: 1
mck
Reputation: 42392
ValueError: time data '2020-11-16T08:42:10+01:00' does not match format '%Y-%m-%dT%H:%M:%SZ'
Try use this line instead. The date format is incorrect according to the traceback:
date_time_obj = dt.strptime(date_time_str, "%Y-%m-%dT%H:%M:%S%z")
Upvotes: 2
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