CODEWITHSUNDEEP
rrhdf5
JcGKitten
JcGKitten

Reputation: 3

R and rhdf5: Each function throws a Error: segfault from C stack overflow

I installed the rhdf5 package with BiocManager and wanted to use the h5write function to write a dataframe to a hdf5 file. But with each function from this package I only get:

> rhdf5::h5write(df, file="test3.hdf5", name ="table")
Error: segfault from C stack overflow

same if I try to open a new file with

> h5createFile("test3.hdf5")
Error: segfault from C stack overflow

R version is 4.0.2.

I didn't found any other users with this problem, maybe somebody might know a reason for this behavior, otherwise the R is working fine...

Thanks to all and have a nice day. Max

Upvotes: 0

Views: 125

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