CODEWITHSUNDEEP
r
Annie Wright
Annie Wright

Reputation: 87

How to present results of restricted cubic splines in a cox regression

I have used the 'rms' package to use restricted cubic splines in my cox regression model.

Example of my univariate code

S_HTN<-Surv(data_HTN$time+data_HTN$age, data_HTN$event_HTN)
htn_dd<-datadist(data_HTN)
option(datadist='htn_dd')
HTN_spline<-cph(S_HTN~rcs(centiles,3), data=data_HTN)

I have plotted these via ggplot fine but what I want to know if I can see where the knots are and then use these in other analyses?

Upvotes: 0

Views: 963

Answers (1)

Gnueghoidune
Gnueghoidune

Reputation: 1357

You can access the formula of your fitted model along with the knot locations by using the function Function(), i.e. Function(HTN_spline).

However, you can also adjust knot locations manually, with x, y and z being your three desired knots:

HTN_spline <- cph(S_HTN ~ rms::rcs(centiles, c(x, y, z)), data=data_HTN)

Upvotes: 1

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