Reputation: 31
I have the following image to analyze and extract the porosity out of it (black dots).
My issue is that my code might be picking up on the scratches (defects from polishing the cross-sections). I am looking for a way to remove the scratches.
I tried Inpainting (https://github.com/Chandrika372/Image-Restoration-by-Inpainting-Algorithm/blob/main/Inpainting.py) but the scratches are too small for detection. I also found few examples running on C and with Matlab, but if I use my image as an input, the output is still the same; the scratches seem too fine for the algos.
Any help would be appreciated.
Upvotes: 2
Views: 836
Reputation: 46650
A simple Otsu's threshold should do it. The idea is to Gaussian blur to remove noise then cv2.bitwise_and
to extract the dots.
Binary image
Result
You can also optionally filter out large/small dots using contour area filtering with a threshold value
import cv2
# Load image, grayscale, Gaussian blur, Otsu's threshold
image = cv2.imread("1.png")
gray = cv2.cvtColor(image, cv2.COLOR_BGR2GRAY)
blur = cv2.GaussianBlur(gray, (5,5), 0)
thresh = cv2.threshold(blur, 0, 255, cv2.THRESH_BINARY_INV + cv2.THRESH_OTSU)[1]
# OPTIONAL to filter out small/large dots using contour area filtering
# Adjust the area to only keep larger dots
'''
DOT_AREA = 10
cnts = cv2.findContours(thresh, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE)
cnts = cnts[0] if len(cnts) == 2 else cnts[1]
for c in cnts:
area = cv2.contourArea(c)
if area < DOT_AREA:
cv2.drawContours(thresh, [c], -1, 0, -1)
'''
# Bitwise_and to extract dots
result = cv2.bitwise_and(image, image, mask=thresh)
result[thresh==0] = 255
cv2.imshow("thresh", thresh)
cv2.imshow("result", result)
cv2.waitKey()
Upvotes: 2