Reputation: 33
I would like to make my data have different colors for species and different patterns for sex. However, I can only set to make it different colors according to the sex. Here is my data, data
This is how I run my script,
#making bar plot
library(readr)
library(ggplot2)
# loading and checking the data
data_summary <- read_csv("trial.csv")
print(data_summary)
# coloured barplot
ggplot(data_summary, aes(x = factor(species), y = mean, fill = sex)) +
geom_bar(stat = "identity", position = "dodge", show.legend = FALSE) +
geom_errorbar(aes(ymin=mean-sd, ymax=mean+sd), position = position_dodge(0.9), width = 0.2, show.legend = FALSE) +
labs(x="", y="") + theme_bw() +
theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank()) +
theme(legend.position = c(0.1, 0.75)) + ylim(0, 80) +
scale_fill_manual(values=c("#870A30","#D3D3D3"))
Upvotes: 2
Views: 992
Reputation: 173858
You can use ggpattern
to get different patterns per sex and different colors per species:
library(ggplot2)
library(ggpattern)
ggplot(data_summary, aes(x = species, y = mean, fill = species, group = sex)) +
geom_col_pattern(position = "dodge", aes(pattern = sex),
pattern_fill = "white", pattern_color = "white",
pattern_angle = 45, show.legend = FALSE) +
geom_errorbar(aes(ymin=mean-sd, ymax=mean+sd), position = position_dodge(0.9),
width = 0.2, show.legend = FALSE) +
labs(x = NULL, y = NULL) +
theme_classic() +
theme(panel.border = element_rect(linewidth = 0.5, fill = NA)) +
ylim(0, 80) +
scale_fill_manual(values = c("#870A30" ,"#D3D3D3"))
Upvotes: 2
Reputation: 4524
There is a nice package called ggpattern
which offers hatching for geoms
. Unfortunately it is not available for the R version I am using.
But I would like to offer different alpha
values for the fill color.
The alpha
itself can defined like scale_alpha_manual(values = c(.5,1))
.
library(ggplot2)
data_summary <- read.table(text = "
species,sex,mean,sd,tukey
species_a,female,67,4.17,a
species_b,male,62.2,4.8,a
species_b,female,61.3,6.43,a
species_a,male,49.7,16.2,a
", header = T, sep = ','
)
# coloured barplot
ggplot(data_summary, aes(x = factor(species), y = mean, fill = sex, alpha = species)) +
geom_bar(stat = "identity", position = "dodge", show.legend = FALSE) +
geom_errorbar(aes(ymin=mean-sd, ymax=mean+sd), position = position_dodge(0.9), width = 0.2, show.legend = FALSE) +
labs(x="", y="") + theme_bw() +
theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank()) +
theme(legend.position = c(0.1, 0.75)) + ylim(0, 80) +
scale_fill_manual(values=c("#870A30","#D3D3D3")) +
scale_alpha_manual(values = c(.5,1))
Upvotes: 0
Reputation: 78927
This can be done using fill = interaction(..,..)
:
library(ggplot2)
ggplot(data_summary, aes(x = factor(species), y = mean, fill = interaction(species,sex))) +
geom_bar(stat = "identity", position = "dodge", show.legend = FALSE) +
geom_errorbar(aes(ymin=mean-sd, ymax=mean+sd), position = position_dodge(0.9), width = 0.2, show.legend = FALSE) +
labs(x="", y="") +
theme_bw() +
theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank()) +
theme(legend.position = c(0.1, 0.75)) + ylim(0, 80) +
scale_fill_manual(values= c("#870A30", '#009E73', '#CC79A7', "#D3D3D3"))
Upvotes: 1
Reputation: 41285
An option could be using ggplot_build
and add a vector of four colors (you change this to what you want) to the fill
column of the bars layer like this:
library(ggplot2)
p <- ggplot(data_summary, aes(x = factor(species), y = mean, fill = sex)) +
geom_bar(stat = "identity", position = "dodge", show.legend = FALSE) +
geom_errorbar(aes(ymin=mean-sd, ymax=mean+sd), position = position_dodge(0.9), width = 0.2, show.legend = FALSE) +
labs(x="", y="") + theme_bw() +
theme(panel.grid.major = element_blank(), panel.grid.minor = element_blank()) +
theme(legend.position = c(0.1, 0.75)) + ylim(0, 80) +
scale_fill_manual(values=c("#870A30","#D3D3D3"))
q <- ggplot_build(p)
q$data[[1]]$fill <- c("#870A30","#D3D3D3", '#009E73', '#CC79A7')
q <- ggplot_gtable(q)
plot(q)
Created on 2023-01-02 with reprex v2.0.2
Upvotes: 1