CODEWITHSUNDEEP
coordinatesroiatlasniftimri
Monireh Taimouri
Monireh Taimouri

Reputation: 1

how to present a specific brain region on right and left side of the brain glass?

I have this mat file from Craddock atlas and all coordinates of every regions are in this file. mat = scipy.io.loadmat("C:/Users/Monir/Downloads/atlases/craddock.mat") coordinates = [mat['ROI'][0][i][2].T for i in range(len(mat['ROI'][0]))]

in the picture the first region in AAL atlas are presenting in red.And I used BrainViewer in Matlap. However, for Craddock atlas I couldn't find any nifti file. So I think using the coordinates I should creat a nifti file from Craddock in MNI152.

please let me know if anyone know how I can craet nifti file or using the coordinates I can present a specific region in brain glass.

Upvotes: 0

Views: 27

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