Reputation: 111
I have the following plot, that I am trying to add SE shading bars to.
It is using this dataframe of predicted values from my model.
data.frame(
x = c(-0.4, -0.2, 0, 0.2, 0.4, 0.6, 0.8),
predicted = c(0.68210177774552,0.824971306553031,
0.911923452641176,0.957884075392982,0.98037732841837,
0.990970636204506,0.995869238009664),
std.error = c(0.38195580456581,0.22923983122453,
0.123053035742282,0.183476660090966,0.328809680207388,
0.488362992665536,0.651775655589864),
conf.low = c(0.503706928219636,0.750465569524191,
0.890530388978947,0.940737822137466,0.963272013048915,
0.976820374876465,0.985337590318705),
conf.high = c(0.819367367560485,0.880765628369274,
0.929466912178259,0.97022643270505,0.989602181967697,
0.996513543605265,0.998845128758168),
group = as.factor(c("PupilAmp_SMC",
"PupilAmp_SMC","PupilAmp_SMC","PupilAmp_SMC",
"PupilAmp_SMC","PupilAmp_SMC","PupilAmp_SMC")),
group_col = as.factor(c("PupilAmp_SMC",
"PupilAmp_SMC","PupilAmp_SMC","PupilAmp_SMC",
"PupilAmp_SMC","PupilAmp_SMC","PupilAmp_SMC"))
)
I keep trying to use the following code, but I keep getting an error.. not sure how to make the ribbon geom work. Any help would be appreciated!
PupilPEA_SMC <- ggplot(PEAPupilGrob, aes(x= x, predicted)) +
geom_line(color = "red", size = 2) +
ylim(.65,1.0) +
labs (y = "Likelihood of Post-Error Accuracy", x = "Single Trial Pupillary Amplitude") +
geom_ribbon(PEAPupilGrob, aes(ymin=predicted+std.error, ymax= predicted - std.error), alpha=0.1, fill = "red",
color = "black", linetype = "dotted") +
theme_bw() +
theme(text = element_text(size = 20))
PupilPEA_SMC
Upvotes: 0
Views: 41
Reputation: 1881
This would work:
ggplot(PEAPupilGrob, aes(x = x, predicted)) +
geom_line(color = "red", size = 2) +
ylim(0.3, 1.7) +
labs (y = "Likelihood of Post-Error Accuracy", x = "Single Trial Pupillary Amplitude") +
geom_ribbon(
aes(
ymin = predicted - std.error,
ymax = predicted + std.error
),
alpha = 0.1,
fill = "red",
color = "black",
linetype = "dotted"
) +
theme_bw() +
theme(text = element_text(size = 20))
Upvotes: 1