Reputation: 11
Creating a box plot in R using ggboxplot. Using geom_point to add individual data points and position = position_jitter(width = 0.2)) to spread them out.
The generated plot consistently adds an extra point at y max (see image). So if n = 12, there are 13 points. I can't find any reason for this to be occurring. Code below:
plot <- ggboxplot(data, x = "treatment", y = "value", fill = "treatment", width = 0.4) + stat_summary(fun="mean", geom="point", shape=23, size=3, fill="white", position = position_dodge(width = 0.7)) +
geom_point(data = data, aes(x = treatment, y = value),
position = position_jitter(width = 0.2)) +
labs(x = "Treatment", y = "Concentration") +
guides(fill = "none") +
scale_fill_manual(values = cb_palette) +
scale_y_continuous(breaks = c(5,10,15,20,25,30,35), limits = c(5,32)) +
theme_bw(base_size = 18) +
theme(panel.grid.major.x = element_blank(),
panel.grid.minor.x = element_blank(),
panel.grid.minor.y = element_blank()
)
plot
Example dataset
sample treatment value
1 1 12.15980346
1 2 10.97915135
1 3 10.24602834
1 4 12.00826926
2 1 10.53893152
2 2 9.62200229
2 3 8.661327288
2 4 9.47010368
3 1 7.980431308
3 2 8.299834385
3 3 6.167766975
3 4 8.725891659
4 1 10.95137118
4 2 12.79031335
4 3 10.4178423
4 4 11.20135523
5 1 11.60301628
5 2 13.78625968
5 3 13.61339271
5 4 12.8500865
6 1 8.806134878
6 2 9.18175894
6 3 9.95901536
6 4 8.878521261
7 1 11.56143798
7 2 11.14678642
7 3 15.99024738
7 4 14.47572695
8 1 16.72820906
8 2 15.91346874
8 3 16.18871308
8 4 14.47575009
9 1 16.23862546
9 2 14.78037788
9 3 15.10731239
9 4 14.96026006
10 1 9.84265316
10 2 12.25204501
10 3 9.44290475
10 4 11.78481592
11 1 17.9120574
11 2 15.3130744
11 3 16.49442194
11 4 18.19518935
12 1 24.84358568
12 2 26.38818249
12 3 30.31382726
12 4 21.29795724
Any help would be greatly appreciated!
I have tried:
Upvotes: 1
Views: 41