StackOverflow Questions for Tag: protein-database

biohacker

Reputation: 152

What is the easiest way in Biopython to duplicate or "clone" a chain in a PDB file?

bioinformaticsbiopythonprotein-database

Score: 1

Answers: 3

Connor Brown

Reputation: 1

Nvidia cluster - RAM requirements for protein folding diffusion model

cluster-computingbert-language-modelembeddingprotein-database

Score: 0

Answers: 0

Kathryn Myers

Reputation: 11

Printing residues in a selection in Pymol?

bioinformaticsprotein-databasepymol

Score: 1

Answers: 1

vdlmrc

Reputation: 755

Bond Type of ligands in PDB files all appear as SINGLE

pdbrdkitprotein-database

Score: 3

Answers: 1

Alber

Reputation: 1

Can't prepare protein or Docking in Discovery Studio

protein-databasediscovery

Score: 0

Answers: 0

user4934761

Reputation:

How to get network into protein shape in cytoscape?

cytoscapeprotein-database

Score: 0

Answers: 1

user12298516

Reputation:

How to plot the free energy landscape of protein structure?

pythonbioinformaticsprotein-database

Score: 0

Answers: 1

Nazifa Ahmed Moumi

Reputation: 1

Cytoscape Diffusion Algorithm

pluginsnetwork-programmingcytoscapeprotein-database

Score: 0

Answers: 1

Marburg-Researcher

Reputation: 11

Is there a way to quickly identify all matching coding region sequences based on a list of protein identifiers from all GTDB representatives?

linuxdatabasebioinformaticsprotein-database

Score: 1

Answers: 1

Jamie

Reputation: 782

How to get a Protein Data Bank API Post to work

pythonpython-requestsprotein-database

Score: 0

Answers: 0

mahaswap

Reputation: 96

How to unfold only protein atoms using Bio.PDB.Selection?

pythonbioinformaticsbiopythonpdbprotein-database

Score: 5

Answers: 1

Mateo del Rio Lanse

Reputation: 33

Getting Atom Names in Bio.PDB

pythonbiopythonprotein-database

Score: 0

Answers: 2

JeongSoo Na

Reputation: 27

Open Babel Warning in PerceiveBondOrders

pythonprotein-databasesdfopenbabel

Score: 0

Answers: 1

Rashid

Reputation: 1384

Using Kaggle code/model to predict classifications for unseen dataset

pythonscikit-learnmulticlass-classificationprotein-database

Score: -1

Answers: 1

Steven DeLaGarza

Reputation: 11

Error when adding centrality_type to xina_plot_all function in XINA package

rdebuggingerror-handlingprotein-database

Score: 1

Answers: 0

user366312

Reputation: 16894

Why is this source code giving incorrect RMSD value?

pythonbiopythonprotein-database

Score: 2

Answers: 1

Emily

Reputation: 1

R: unable to use select() on variables in dataframe from PDB

rprotein-database

Score: 0

Answers: 0

public static void

Reputation: 1193

Custom string type with a limited alphabet

postgresqltypesbioinformaticsprotein-database

Score: 1

Answers: 1

Steven C. Howell

Reputation: 18584

Use grep to find either of two strings without changing the order of the lines?

regexgrepprotein-database

Score: 19

Answers: 3

Viswa Vittal

Reputation: 9

MD analysis using Python

pythonsimulationorientationprotein-databasemdanalysis

Score: 1

Answers: 1

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StackOverflow Questions for Tag: protein-database

What is the easiest way in Biopython to duplicate or &quot;clone&quot; a chain in a PDB file?

Nvidia cluster - RAM requirements for protein folding diffusion model

Printing residues in a selection in Pymol?

Bond Type of ligands in PDB files all appear as SINGLE

Can&#39;t prepare protein or Docking in Discovery Studio

How to get network into protein shape in cytoscape?

How to plot the free energy landscape of protein structure?

Cytoscape Diffusion Algorithm

Is there a way to quickly identify all matching coding region sequences based on a list of protein identifiers from all GTDB representatives?

How to get a Protein Data Bank API Post to work

How to unfold only protein atoms using Bio.PDB.Selection?

Getting Atom Names in Bio.PDB

Open Babel Warning in PerceiveBondOrders

Using Kaggle code/model to predict classifications for unseen dataset

Error when adding centrality_type to xina_plot_all function in XINA package

Why is this source code giving incorrect RMSD value?

R: unable to use select() on variables in dataframe from PDB

Custom string type with a limited alphabet

Use grep to find either of two strings without changing the order of the lines?

MD analysis using Python

What is the easiest way in Biopython to duplicate or "clone" a chain in a PDB file?

Can't prepare protein or Docking in Discovery Studio