StackOverflow Questions for Tag: singularity-container

Pietro

Reputation: 21

Singularity build crashes because of pip memory usage

piptorchsingularity-container

Score: 0

Answers: 1

trouselife

Reputation: 969

Trying to build a Singularity .sif file from a .def file referencing a local docker image - not working

dockersingularity-container

Score: 0

Answers: 0

Matheus Correia

Reputation: 101

JupyterLab not identifying hostname when launched

pythonjupyter-labsingularity-container

Score: 1

Answers: 1

Aziuth

Reputation: 3902

Singularity: failed to resolve session directory

singularity-container

Score: 2

Answers: 1

Tieyuan Bian

Reputation: 111

Singularity showed cleanup error and says some directories do not exist

singularity-container

Score: 0

Answers: 0

Crisandro Allen Lazo

Reputation: 21

How to Run Commands in a Singularity from Shell Script

pythonshellsingularity-container

Score: 0

Answers: 1

boltz

Reputation: 75

Spack Error: Additional properties are not allowed

singularity-containerapptainerspack

Score: 0

Answers: 0

anria

Reputation: 47

The /etc directory appears empty when I try to access files using R

rbashshellsingularity-container

Score: 0

Answers: 1

Rafaela Carolina dos Anjos Sch

Reputation: 1

Issue with Singularity Command Recognition for Fastq.gz Files

linuxdockerpermissionsbioinformaticssingularity-container

Score: 0

Answers: 1

Newbie

Reputation: 51

Encountered Errors in Storing Images using Singularity in Cluster

dockerdebuggingsingularity-container

Score: 1

Answers: 1

epigenome

Reputation: 81

Using Docker with Snakemake (as motivated by the Snakemake documentation) does not provide a true docker container?

dockercondasnakemakesingularity-container

Score: 4

Answers: 1

anria

Reputation: 47

Call singularity exec from a shell script in R

rbashshellsingularity-container

Score: 0

Answers: 0

aknodt

Reputation: 173

IPC Server handler / File does not exist, running hadoop in singularity container

hadoopsingularity-container

Score: 0

Answers: 0

Thomas

Reputation: 331

MPI program running within a Singularity container on a cluster

mpisingularity-container

Score: 1

Answers: 1

bidby

Reputation: 738

Why does mounting the home directory in singularity container break a python import?

pythonpython-3.xubuntu-18.04singularity-containerneuron-simulator

Score: 2

Answers: 1

Thomas

Reputation: 473

--no-home Singularity flag doesn't work on Docker container in a cluster node

dockerhpcsingularity-container

Score: 1

Answers: 1

Krishna

Reputation: 1382

conveyor failed while building an apptainer image from defintion file

dockersingularity-containerapptainer

Score: 1

Answers: 0

Pinko

Reputation: 79

Apptainer pull failed to get checksum

dockersingularity-containerapptainer

Score: 1

Answers: 1

Jeremy

Reputation: 21

Intermediate build checkpoints for singularity containers?

buildsingularity-containerapptainer

Score: 1

Answers: 1

Niek de Klein

Reputation: 8834

How to run piped command with Python subprocess without deadlocking?

pythonsubprocesssnakemakesingularity-container

Score: 0

Answers: 0

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StackOverflow Questions for Tag: singularity-container

Singularity build crashes because of pip memory usage

Trying to build a Singularity .sif file from a .def file referencing a local docker image - not working

JupyterLab not identifying hostname when launched

Singularity: failed to resolve session directory

Singularity showed cleanup error and says some directories do not exist

How to Run Commands in a Singularity from Shell Script

Spack Error: Additional properties are not allowed

The /etc directory appears empty when I try to access files using R

Issue with Singularity Command Recognition for Fastq.gz Files

Encountered Errors in Storing Images using Singularity in Cluster

Using Docker with Snakemake (as motivated by the Snakemake documentation) does not provide a true docker container?

Call singularity exec from a shell script in R

IPC Server handler / File does not exist, running hadoop in singularity container

MPI program running within a Singularity container on a cluster

Why does mounting the home directory in singularity container break a python import?

--no-home Singularity flag doesn&#39;t work on Docker container in a cluster node

conveyor failed while building an apptainer image from defintion file

Apptainer pull failed to get checksum

Intermediate build checkpoints for singularity containers?

How to run piped command with Python subprocess without deadlocking?

--no-home Singularity flag doesn't work on Docker container in a cluster node