CODEWITHSUNDEEP
rggplot2
pogibas
pogibas

Reputation: 28309

Flip/transpose a heatmap in ggplot2

Code bellow generates heatmap that goes from bottom left to top right 

library(ggplot2)
library(reshape2)
set.seed(111)

n <- 10
m <- matrix(rnorm(n^2), n, n)
m <- cor(m)
m <- melt(m)

ggplot(m, aes(Var1, Var2, fill = value)) + 
    geom_tile()

enter image description here

How can I modify my data (probably modify melt result) so heatmap would go from top left to bottom right, for result like this enter image description here

Upvotes: 6

Views: 3380

Answers (2)

Sumar
Sumar

Reputation: 11

This works for me

ggplot(m, aes(aes(reorder(Var1, desc(Var1)), Var2, fill = value)) + 
    geom_tile()

result plot

Upvotes: 1

Adam Birenbaum
Adam Birenbaum

Reputation: 950

A terrible solution compared to @Axeman's (but more fun) is to apply a rotational transformation matrix to the data.

To understand what kind of transformation we need, I plotted only the diagonal (value=1) points on a 3D scatter plot.

The rotational matrix about the z (value) axis

Including the added constant, the final equation is

There is probably a better way to vectorize this transformation, but this is how I did it.

rot_m <- matrix(c(0,-1,0,1,0,0,0,0,1),3,3)

ftransform <- function(x){
   t(rot_m %*% as.numeric(matrix(m[x,],3,1)) + matrix(c(0,11,0),3,1))
 }

foo <- lapply(1:nrow(m),ftransform)

foo <- data.frame(do.call(rbind,foo))
names(foo) <- c("Var1","Var2","value")
ggplot(foo, aes(Var1,Var2,fill=value)) + 
   geom_tile()

EDIT: Apologies about the weird image format/layout.

Upvotes: 3

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