Reputation: 11
I am trying to get some results by using Rcpp and this is the code.
#include <Rcpp.h>
#include <math.h>
using namespace Rcpp;
enter code here
// [[Rcpp::export]]
double compssr(NumericMatrix dist, NumericVector x, int n, int p) {
double ssr = 0; double del_sq = 0; double del_ij = 0;
int i, j, ip;
for (i = 0; i < n; i++) {
for (j = 0; j < i; j++) {
for (ip = 0; ip < p; ip++) {
del_sq = del_sq + (x(i, ip) - x(j, ip))*(x(i, ip) - x(j, ip));
if (i == j) del_sq = 0;
}
del_ij = sqrt(del_sq);
ssr = ssr + (dist(i, j) - del_ij)*(dist(i, j) - del_ij);
}}
return ssr;
}
NumericMatrix Scaling_X(NumericVector xbar, NumericMatrix x, double n, double p) {
NumericMatrix Sig_x(p, p);
int i, ii, ip, ip2;
for (ii = 0; ii < n; ii++) {
for (i = 0; i < p; i++) {
x(ii, i) = x(ii, i) - xbar(i);
}}
for (i = 0; i < n; i++) {
for (ip = 0; ip < p; ip++) {
for (ip2 = 0; ip2 < p; ip2++) {
Sig_x(ip, ip2) = Sig_x(ip, ip2) + x(i, ip)*x(i, ip2);
}}}
for (i = 0; i < Sig_x.ncol(); i++) {
for (ii = 0; ii < Sig_x.nrow(); ii++) {
Sig_x(i, ii) = Sig_x(i, ii) / n;
}}
return Sig_x;
}
In fact there are some more functions and the file name of this code is "test.cpp" And I called this file in R by using
sourceCpp("test.cpp")
There was no error and I could use the function "compssr" the first function(return type: double) But I couldn't call the function Scaling_X
Is there any error in my code? I made other functions and I could use the function with return type double, but I couldn't use others(NumericMatrix, NumericVector, List)
Upvotes: 0
Views: 90
Reputation: 368509
You are missing the
// [[Rcpp::export]]
in front of function Scaling_X
so the compileAttributes()
function does as it has been told: compile both functions, make just one available.
Upvotes: 5