Reputation: 997
I'm trying to get data from txt file with pandas.read_csv but it doesn't show the repeated(same) values in the file such as I have 2043 in the row but It shows it once not in every row.
My file sample
Result set
All the circles I've drawn should be 2043 also but they are empty.
My code is :
import pandas as pd
df= pd.read_csv('samplefile.txt', sep='\t', header=None,
names = ["234", "235", "236"]
Upvotes: 1
Views: 380
Reputation: 2417
A word of warning with MultiIndex
as I was bitten by this yesterday and wasted time trying to trouble shoot a non-existant problem.
If one of your index levels is of type float64
then you may find that the indexes are not shown in full. I had a dataframe I was df.groupby().describe()
and the variable I was performing the groupby()
on was originally a long int
, at some point it was converted to a float
and when printing out this index was rounded. There were a number of values very close to each other and so it appeared on printing that the groupby()
had found multiple levels of the second index.
Thats not very clear so here is an illustrative example...
import numpy as np
import pandas as pd
index = np.random.uniform(low=89908893132829,
high=89908893132929,
size=(50,))
df = pd.DataFrame({'obs': np.arange(100)},
index=np.append(index, index)).sort_index()
df.index.name = 'index1'
df['index2'] = [1, 2] * 50
df.reset_index(inplace=True)
df.set_index(['index1', 'index2'], inplace=True)
Look at the dataframe and it appears that there is only one level of index1...
df.head(10)
obs
index1 index2
8.990889e+13 1 4
2 54
1 61
2 11
1 89
2 39
1 65
2 15
1 60
2 10
groupby(['index1', 'index2']).describe()
and it looks like there is only one level of index1
...
summary = df.groupby(['index1', 'index2']).describe()
summary.head()
obs
count mean std min 25% 50% 75% max
index1 index2
8.990889e+13 1 1.0 4.0 NaN 4.0 4.0 4.0 4.0 4.0
2 1.0 54.0 NaN 54.0 54.0 54.0 54.0 54.0
1 1.0 61.0 NaN 61.0 61.0 61.0 61.0 61.0
2 1.0 11.0 NaN 11.0 11.0 11.0 11.0 11.0
1 1.0 89.0 NaN 89.0 89.0 89.0 89.0 89.0
But if you look at the actual values of index1
in either you see that there are multiple unique values. In the original dataframe...
df.index.get_level_values('index1')
Float64Index([89908893132833.12, 89908893132833.12, 89908893132834.08,
89908893132834.08, 89908893132835.05, 89908893132835.05,
89908893132836.3, 89908893132836.3, 89908893132837.95,
89908893132837.95, 89908893132838.1, 89908893132838.1,
89908893132838.6, 89908893132838.6, 89908893132841.89,
89908893132841.89, 89908893132841.95, 89908893132841.95,
89908893132845.81, 89908893132845.81, 89908893132845.83,
89908893132845.83, 89908893132845.88, 89908893132845.88,
89908893132846.02, 89908893132846.02, 89908893132847.2,
89908893132847.2, 89908893132847.67, 89908893132847.67,
89908893132848.5, 89908893132848.5, 89908893132848.5,
89908893132848.5, 89908893132855.17, 89908893132855.17,
89908893132855.45, 89908893132855.45, 89908893132864.62,
89908893132864.62, 89908893132868.61, 89908893132868.61,
89908893132873.16, 89908893132873.16, 89908893132875.6,
89908893132875.6, 89908893132875.83, 89908893132875.83,
89908893132878.73, 89908893132878.73, 89908893132879.9,
89908893132879.9, 89908893132880.67, 89908893132880.67,
89908893132880.69, 89908893132880.69, 89908893132881.31,
89908893132881.31, 89908893132881.69, 89908893132881.69,
89908893132884.45, 89908893132884.45, 89908893132887.27,
89908893132887.27, 89908893132887.83, 89908893132887.83,
89908893132892.8, 89908893132892.8, 89908893132894.34,
89908893132894.34, 89908893132894.5, 89908893132894.5,
89908893132901.88, 89908893132901.88, 89908893132903.27,
89908893132903.27, 89908893132904.53, 89908893132904.53,
89908893132909.27, 89908893132909.27, 89908893132910.38,
89908893132910.38, 89908893132911.86, 89908893132911.86,
89908893132913.4, 89908893132913.4, 89908893132915.73,
89908893132915.73, 89908893132916.06, 89908893132916.06,
89908893132922.48, 89908893132922.48, 89908893132923.44,
89908893132923.44, 89908893132924.66, 89908893132924.66,
89908893132925.14, 89908893132925.14, 89908893132928.28,
89908893132928.28],
dtype='float64', name='index1')
...and in the summarised dataframe...
summary.index.get_level_values('index1')
Float64Index([89908893132833.12, 89908893132833.12, 89908893132834.08,
89908893132834.08, 89908893132835.05, 89908893132835.05,
89908893132836.3, 89908893132836.3, 89908893132837.95,
89908893132837.95, 89908893132838.1, 89908893132838.1,
89908893132838.6, 89908893132838.6, 89908893132841.89,
89908893132841.89, 89908893132841.95, 89908893132841.95,
89908893132845.81, 89908893132845.81, 89908893132845.83,
89908893132845.83, 89908893132845.88, 89908893132845.88,
89908893132846.02, 89908893132846.02, 89908893132847.2,
89908893132847.2, 89908893132847.67, 89908893132847.67,
89908893132848.5, 89908893132848.5, 89908893132855.17,
89908893132855.17, 89908893132855.45, 89908893132855.45,
89908893132864.62, 89908893132864.62, 89908893132868.61,
89908893132868.61, 89908893132873.16, 89908893132873.16,
89908893132875.6, 89908893132875.6, 89908893132875.83,
89908893132875.83, 89908893132878.73, 89908893132878.73,
89908893132879.9, 89908893132879.9, 89908893132880.67,
89908893132880.67, 89908893132880.69, 89908893132880.69,
89908893132881.31, 89908893132881.31, 89908893132881.69,
89908893132881.69, 89908893132884.45, 89908893132884.45,
89908893132887.27, 89908893132887.27, 89908893132887.83,
89908893132887.83, 89908893132892.8, 89908893132892.8,
89908893132894.34, 89908893132894.34, 89908893132894.5,
89908893132894.5, 89908893132901.88, 89908893132901.88,
89908893132903.27, 89908893132903.27, 89908893132904.53,
89908893132904.53, 89908893132909.27, 89908893132909.27,
89908893132910.38, 89908893132910.38, 89908893132911.86,
89908893132911.86, 89908893132913.4, 89908893132913.4,
89908893132915.73, 89908893132915.73, 89908893132916.06,
89908893132916.06, 89908893132922.48, 89908893132922.48,
89908893132923.44, 89908893132923.44, 89908893132924.66,
89908893132924.66, 89908893132925.14, 89908893132925.14,
89908893132928.28, 89908893132928.28],
dtype='float64', name='index1')
I wasted time scratching my head wondering why my groupby([
index1,
index2)
had produced only one level of index1
!
Upvotes: 1
Reputation: 862691
You get MultiIndex
, so first level value are not shown only.
You can convert MultiIndex
to columns by reset_index
:
df = df.reset_index()
Or specify each column in parameter names for avoid MultiIndex
:
df = pd.read_csv('samplefile.txt', sep='\t', names = ["one","two","next", "234", "235", "236"]
Upvotes: 4