CandyClass
CandyClass

Reputation: 41

samtools and seqkit installation failed with conda (bioconda)

Using macOS Sonoma 14.1, and I've tried to install samtools and seqkit by bioconda, examples for samtools input and output are as follows, and for seqkit are the same.

command: conda install -c bioconda samtools

return: Collecting package metadata (current_repodata.json): done Solving environment: unsuccessful initial attempt using frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: unsuccessful initial attempt using frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

Current channels:

To search for alternate channels that may provide the conda package you're looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

Also I do checked anaconda.org, and even follows the command in there: conda install bioconda::samtools

and same fail happens. and OS seems capable too.

I've tried conda install -c bioconda samtools conda install samtools none of them works.

Upvotes: 2

Views: 26

Answers (0)

Related Questions