StackOverflow Questions for Tag: genome

Juliette Lewis

Reputation: 13

parallel: Error: $XDG_CACHE_HOME can only contain [-a-z0-9_+,.%:/= ]

bashgnu-parallelgenomexdgutils

Score: 1

Answers: 2

altuffin

Reputation: 11

1.9 TB is insufficient memory for minimap2 whole genome alignment

bioinformaticsgenome

Score: 1

Answers: 0

Scheggia

Reputation: 43

How manage columns with (values ; separated) by taking the columns name from values in R

rgenome

Score: 3

Answers: 2

rbierman

Reputation: 91

Do msprime simulated loci correspond with the actual positions using the input HapMap?

pythonbioinformaticsgenomegenomics

Score: 0

Answers: 0

nikhil int

Reputation: 309

Error loading paramSweep_v3 in DoubletFinder in R

rgenomeseuratrna-seq

Score: 0

Answers: 2

DJB

Reputation: 1

ValueError using Medaka: Expected 96 from C header, got 88 from PyObject

numpybioinformaticsvalueerrorgenomebioconda

Score: 0

Answers: 1

set_user123

Reputation: 21

Sommer Package: mmer prediction error because of singular matrix

rmixed-modelsgenome

Score: 1

Answers: 0

hey0god

Reputation: 55

How to count number of occurrence consecutive pattern spanning over lines in Bash?

linuxbashgenome

Score: 1

Answers: 5

Awa

Reputation: 1

Missing Output Exception Error in Snakemake with output directory modified

wildcardmissing-datasnakemakegenome

Score: 0

Answers: 0

Izzy

Reputation: 53

Is there a way to shorten long intergenic regions in gggenes?

rggplot2visualizationgenomegggenes

Score: 0

Answers: 4

Tri M. Le

Reputation: 53

Error in breseq during running bowtie2

bioinformaticsgenomesequencingvariants

Score: 3

Answers: 1

Manuel

Reputation: 1

RNAseq sequence alignment

mappingdna-sequencegenomerna-seq

Score: 0

Answers: 0

elasmojoe757

Reputation: 3

What is a program in R that can complete a pathway analysis for non-model organisms?

rdata-analysisgeneticsgenome

Score: 0

Answers: 0

Charité Learner

Reputation: 394

How to get human-mouse conservation score from UCSC

genome

Score: 1

Answers: 0

bacteria_ber

Reputation: 1

What is wrong with my phylogenetic tree pipeline based on the core genome such that they are branching off too many times?

bioinformaticsphylogenygenome

Score: 0

Answers: 0

Koi

Reputation: 1

How to change values of a single column dataframe if a value in that column matches the value in the other column in R?

rdataframegenome

Score: -1

Answers: 1

SetshabaT

Reputation: 1

Nextflow error: Missing output files in a process

bashbioinformaticsnextflowgenome

Score: 0

Answers: 1

Adría Cruells

Reputation: 13

Nextflow No such variable: id

nextflowgenome

Score: 1

Answers: 1

Antonio J. Pérez

Reputation: 1

gggenes of a long genome region: is it possible to split it?

rbioinformaticsgenome

Score: 0

Answers: 2

Anna

Reputation: 75

Phasing genomes with shapeit5

referencedna-sequencegenome

Score: 0

Answers: 1

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