StackOverflow Questions for Tag: picard
Wei-Chen Pan
Reputation: 3
Error when Running Picard or GATK MergeVcfs Using Snakemake
Score: 0
Views: 122
Answers: 1
Quinn
Reputation: 65
Unable to access jar file (installed in a conda virtual environment)
Score: -1
Views: 1241
Answers: 1
Genetics
Reputation: 311
Why is Picard MarkDuplicates deleting .bam files in place of .bai files in my Snakemake workflow?
Score: 0
Views: 121
Answers: 0
biomedswe
Reputation: 1
Why doesn't subprocess.Popen() give live feed?
Score: 0
Views: 68
Answers: 0
Davy Kavanagh
Reputation: 4959
Picard SamToFastq only extracts one read, then throws an error
Score: 0
Views: 1189
Answers: 1
sirisha sunkara
Reputation: 21
An interesting cron, bash, perl and java problem
Score: 1
Views: 85
Answers: 0
Krischan
Reputation: 51
Is there a way to set parameters for the Java VM when using a Snakemake wrapper?
Score: 3
Views: 661
Answers: 2
Anon
Reputation: 125
R How to obtain the coefficients of a polynomial expression?
Score: 1
Views: 642
Answers: 0
Bingley
Reputation: 1
How to convert fastq to uBAM with picard dock on google cloud
Score: 0
Views: 371
Answers: 1
Glubbdrubb
Reputation: 357
How does one set the RAM and CPU parameters for java programs running in an anaconda environment?
Score: 1
Views: 1620
Answers: 1
Peter Chung
Reputation: 1122
linux merge multiple files in picard
Score: 0
Views: 773
Answers: 1
svural
Reputation: 1031
Does picard markduplicate toggle PCR duplicate samflag
Score: 0
Views: 59
Answers: 0
M.Phillips
Reputation: 1
How to deal with trailing garbage caused from unzipping the hs37d5 fastq file
Score: 0
Views: 817
Answers: 0
user1437708
Reputation: 11
How to get consensus sequence from BAM file format on java (by means of Picard)
Score: 1
Views: 691
Answers: 1