StackOverflow Questions for Tag: pubmed

Denis Sechin

Reputation: 11

Why Entrez esearch doesn't provide all abstracts from PubMed?

pythonbiopythonpubmed

Score: 1

Answers: 0

David912

Reputation: 396

How can I access PubMed's database using BigQuery

google-bigquerypubmedgoogle-patent-search

Score: 0

Answers: 2

panchtox

Reputation: 642

scraping nested xml using cheerio

node.jsxmlweb-scrapingcheeriopubmed

Score: 3

Answers: 1

msa

Reputation: 735

Get full paper content from PubMed via API and list of IDs

pythonpython-3.xpubmed

Score: 4

Answers: 2

Hope Lappen

Reputation: 11

Extracting a list from PubMed XML in R and adding to data frame/tibble

rxmldataframepubmedrentrez

Score: 1

Answers: 3

ting li

Reputation: 1

Extract abstract from PubMed using BioPython and writing to CSV

pythonabstractbiopythonpubmed

Score: 0

Answers: 0

jade123

Reputation: 1

PyMed query top results from PubMed

pubmedpubmed-api

Score: 0

Answers: 0

rempsyc

Reputation: 1018

PubMed query: priority of operations using parenthesis leads to zero results

logical-operatorspubmedpubmed-api

Score: 0

Answers: 1

Radiognome

Reputation: 21

Downloading large chunks of Pubmed abstracts using easyPubMed in R

rpubmed

Score: 2

Answers: 1

AnonymousMe

Reputation: 569

NotXMLError: Failed to parse the XML data

pythonbiopythonpubmedrentrezpubmed-api

Score: 1

Answers: 2

D Greenwood

Reputation: 446

Rentrez pubmed search - order by descending publication date

rpubmedrentrez

Score: 0

Answers: 1

Isa Gallego

Reputation: 1

Extracting data from XML Pubmed articles

pythonxmlextractpubmed

Score: 0

Answers: 0

Intrastellar Explorer

Reputation: 2481

Searching Entrez based on paper title

pythonbiopythonncbipubmed

Score: 0

Answers: 1

kaotech

Reputation: 33

Is there a way to add filters such as article type ("only show meta-analyses") to a PubMed/Entrez esearch API search?

pythonpubmedpubmed-api

Score: 2

Answers: 1

Kahini Wadhawan

Reputation: 454

How to download full article text from Pubmed?

rubybioinformaticstext-miningbiopythonpubmed

Score: 0

Answers: 5

TraPS-VarI

Reputation: 19

pyPubmed API_Key not found?

api-keypubmedpubmed-api

Score: -1

Answers: 1

Başak Uysal

Reputation: 21

Rismed R package fails to run EUtilsGet function

rpubmedpubmed-api

Score: 2

Answers: 1

Richard

Reputation: 65570

How to use the PubMed API to search for an article with an exact title?

http-getpubmed

Score: 11

Answers: 2

Franck Dernoncourt

Reputation: 83387

How can I programmatically get the PMID from the DOI of a paper that isn't in PMC (i.e., that doesn't have a PMCID)?

bioinformaticspubmedncbidoi

Score: 2

Answers: 2

msci

Reputation: 59

How do I get ISSNs and full journal names from a list of abbreviated journal names in R?

rmedicalpubmedjournal

Score: 0

Answers: 1

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StackOverflow Questions for Tag: pubmed

Why Entrez esearch doesn&#39;t provide all abstracts from PubMed?

How can I access PubMed&#39;s database using BigQuery

scraping nested xml using cheerio

Get full paper content from PubMed via API and list of IDs

Extracting a list from PubMed XML in R and adding to data frame/tibble

Extract abstract from PubMed using BioPython and writing to CSV

PyMed query top results from PubMed

PubMed query: priority of operations using parenthesis leads to zero results

Downloading large chunks of Pubmed abstracts using easyPubMed in R

NotXMLError: Failed to parse the XML data

Rentrez pubmed search - order by descending publication date

Extracting data from XML Pubmed articles

Searching Entrez based on paper title

Is there a way to add filters such as article type (&quot;only show meta-analyses&quot;) to a PubMed/Entrez esearch API search?

How to download full article text from Pubmed?

pyPubmed API_Key not found?

Rismed R package fails to run EUtilsGet function

How to use the PubMed API to search for an article with an exact title?

How can I programmatically get the PMID from the DOI of a paper that isn&#39;t in PMC (i.e., that doesn&#39;t have a PMCID)?

How do I get ISSNs and full journal names from a list of abbreviated journal names in R?

Why Entrez esearch doesn't provide all abstracts from PubMed?

How can I access PubMed's database using BigQuery

Is there a way to add filters such as article type ("only show meta-analyses") to a PubMed/Entrez esearch API search?

How can I programmatically get the PMID from the DOI of a paper that isn't in PMC (i.e., that doesn't have a PMCID)?