StackOverflow Questions for Tag: scanpy

Aaron

Reputation: 133

Python importing package as if it is a module

pythonscanpy

Score: 0

Answers: 1

Aaron

Reputation: 133

Trouble installing/importing "scanpy" dependency in Python

pythonscanpy

Score: 0

Answers: 1

user3635401

Reputation: 11

ValueError: '_index' is a reserved name for dataframe columns

pythonpandasdataframescanpyfeature-clustering

Score: 1

Answers: 1

xie186

Reputation: 509

Kivy/KivyMD app runs fine in venv environment but crashes in exe file

pythonkivypyinstallerkivymdscanpy

Score: 0

Answers: 1

gmcr1

Reputation: 21

How to add an observation category on scanpy based on another observation?

pythonmetadatarna-seqscanpy

Score: 2

Answers: 1

Diogo de Moraes

Reputation: 7

How can I downgrade packaging when installing scanpy?

pythonpackagingscanpy

Score: 0

Answers: 1

Brian M.

Reputation: 13

Problem Plotting Scanpy Violin Plots Next to One Another

pythonviolin-plotscanpy

Score: 0

Answers: 2

hgmhgm

Reputation: 11

Scanpy Matplotlib ax objects?

pythonmatplotlibscanpy

Score: -1

Answers: 1

Ofir Shorer

Reputation: 526

How to resolve: "ContextualVersionConflict" on Python?

pythonpipnumballvmlitescanpy

Score: 0

Answers: 0

Laura

Reputation: 11

Library not loaded: @rpath/libhdf5.103.dylib when importing scanpy and tables

pythonpytablesscanpy

Score: 1

Answers: 2

Dan Li

Reputation: 101

How to add a color bar to label the cells from which sample with `annadata.obs['samples']` in the `scanpy.pl.heatmap` plot?

pythonbioinformaticsscanpy

Score: 0

Answers: 1

LPower

Reputation: 1

I have installed ScanPy and AnnData in my linux environment, but I get the following ImportError: cannot import name 'PathLike' from 'anndata.compat'

pythonimporth5pyscanpy

Score: 0

Answers: 0

Ola

Reputation: 13

How do I solve "incompatible numba" error while installing Scanpy?

pythonanacondascanpy

Score: 1

Answers: 2

science_researcher

Reputation: 13

Not able to install scanpy package using conda install or pip

pythonubuntu-20.04scanpy

Score: 1

Answers: 1

Nora_R

Reputation: 61

FileNotFoundError when using scanpy.read

pythonfile-not-foundscanpy

Score: 1

Answers: 1

DoRemy95

Reputation: 634

How to modify the attributes of a class in python using a method without returning the instance (inplace operation)

pythonnumpyinheritancescanpy

Score: 0

Answers: 0

Workhorse

Reputation: 1560

How to change Y Axis label size in matplotlib

pythonpython-3.xmatplotlibplotscanpy

Score: 0

Answers: 1

Aravind Mantravadi

Reputation: 145

ImportError: cannot import name 'stacked_violin' from 'scanpy.plotting._anndata'?

pythonscanpy

Score: 1

Answers: 1

mathog

Reputation: 345

Python3 requires fails in odd way

pythonpython-3.xinstallationvirtualenvscanpy

Score: 1

Answers: 0

leo071

Reputation: 3

Why I have an Error when importing scanpy._compat?

condafailed-installationscanpy

Score: 0

Answers: 1

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StackOverflow Questions for Tag: scanpy

Python importing package as if it is a module

Trouble installing/importing &quot;scanpy&quot; dependency in Python

ValueError: &#39;_index&#39; is a reserved name for dataframe columns

Kivy/KivyMD app runs fine in venv environment but crashes in exe file

How to add an observation category on scanpy based on another observation?

How can I downgrade packaging when installing scanpy?

Problem Plotting Scanpy Violin Plots Next to One Another

Scanpy Matplotlib ax objects?

How to resolve: &quot;ContextualVersionConflict&quot; on Python?

Library not loaded: @rpath/libhdf5.103.dylib when importing scanpy and tables

How to add a color bar to label the cells from which sample with `annadata.obs[&#39;samples&#39;]` in the `scanpy.pl.heatmap` plot?

I have installed ScanPy and AnnData in my linux environment, but I get the following ImportError: cannot import name &#39;PathLike&#39; from &#39;anndata.compat&#39;

How do I solve &quot;incompatible numba&quot; error while installing Scanpy?

Not able to install scanpy package using conda install or pip

FileNotFoundError when using scanpy.read

How to modify the attributes of a class in python using a method without returning the instance (inplace operation)

How to change Y Axis label size in matplotlib

ImportError: cannot import name &#39;stacked_violin&#39; from &#39;scanpy.plotting._anndata&#39;?

Python3 __requires__ fails in odd way

Why I have an Error when importing scanpy._compat?

Trouble installing/importing "scanpy" dependency in Python

ValueError: '_index' is a reserved name for dataframe columns

How to resolve: "ContextualVersionConflict" on Python?

How to add a color bar to label the cells from which sample with `annadata.obs['samples']` in the `scanpy.pl.heatmap` plot?

I have installed ScanPy and AnnData in my linux environment, but I get the following ImportError: cannot import name 'PathLike' from 'anndata.compat'

How do I solve "incompatible numba" error while installing Scanpy?

ImportError: cannot import name 'stacked_violin' from 'scanpy.plotting._anndata'?

Python3 requires fails in odd way